Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02578 ATGGTAAACCCATCTCTAATTGCTGTTCAGTATATTGATGAGATTTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCTATATCAGAGATCACAAGCTAGATTTTGGGCTGATTATGTTGACAAAAAGATATATGCAATGCCAAGGAACATCTGTATCAAAAAGGAAGAAGAACAAGAAGTTGCAAAAAAGGAATTCATAGAAACTCATCTCAAGTTGTTCGAGGGAGAGTTGGGAGACAAGTCTTATTTTGGAGGAGACAACTTTGGTTTTGTGGATATATCACTCATTCCATTCTATGGTCGATTCAAAGCTGTTGAGACCTTCGGCAACCTTGATATAGAGAGCGAATGTCCAAGGTTCATTGCTTGGGGTAAGAGATGCATGAAGATTGAGAGTGTTTCCAAGTCTCTTCCAAACAAAGAAAAGATATCTATGAGTTCGTTGTGGAGATGA 456 0.3816 MVNPSLIAVQYIDEIWNDRSPLLPSDLYQRSQARFWADYVDKKIYAMPRNICIKKEEEQEVAKKEFIETHLKLFEGELGDKSYFGGDNFGFVDISLIPFYGRFKAVETFGNLDIESECPRFIAWGKRCMKIESVSKSLPNKEKISMSSLWR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02578 151 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 26 147 IPR010987 -
Trre12g02578 151 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 144 IPR045073 -
Trre12g02578 151 CDD GST_C_Tau 28 144 IPR045074 GO:0004364|GO:0006749
Trre12g02578 151 SUPERFAMILY GST C-terminal domain-like 14 144 IPR036282 -
Trre12g02578 151 Gene3D - 26 149 - -
Trre12g02578 151 Pfam Glutathione S-transferase, C-terminal domain 67 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02578 Trre-Chr12 30650329 30653349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02578 2 144 Glutathione S-transferase Gene Family AT1G17180 61.538 7.76e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02578 K00799 - gmx:547520 207.994