Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02573 ATGGCATCATTCCAAACCTTCAACTTTGAAACTCAAATTCCACATGAGCTTCTCATATCCCAAATCATGCAAATTCATGCAACAATTTCTAAGTTAGAATCTCTTAGGCCATCAAAACAAGTCAACACCCTTTTCACTCACTTAGTCAAACTTTGCATTCCCCCTTCATCCATTGACATTGAAACCCTACCTCAAGAGGTTAAGACAATGCGTGAGAGCCTCATCAAACTTTGTGGCAAAGCTGAAGGACTTTTAGAGCTTGAATTCTCAACTTTCATTAGCCTCACACCAAACCCAATGAAAAATTTAACACTTTTCCCTTACTATGGAAACTATATCAAATTAGCAAACTATGAGAACAAAATTCTCAAAGAAAATGGTGTTGTCAATGCTAAAAATGTAGCTTTTATAGGATCTGGCCCAATGCCACTAAGTTCCATTATATTGGCAACTCATCACATGGAATCAACTCAATTTGATAATTTTGATATTGATGAAAAGGCTAATGAGGTTGCTAGCAAGATTGTGGCTTCGGATAAAGCACTTGAGAAGAGAATGAAATTTGTGACACAAGATATTATGGAAGTGAAGGAAAAGTTAGGGCAATATGATTGCATTTTTTTAGCTGCACTTGTTGGTATGAGTAGAGGTGAAAAAATGAAGGTTTTAGGTCATATAAGAAAATATATGAAAGAAGGTGGTGTTTTGCTTGTAAGAAGTGCAAAAGGGAGTAGAGCTTTTTTGTATCCAATTGTTGATGAGAATGATGTGATGGATTTTGAGGTGCTTACTATTTTTCATCCAACAGATGATGTGATCAACTCGGTTGTTCTTCTTCAAAAGCCTAAAGCTTGA 855 0.3591 MASFQTFNFETQIPHELLISQIMQIHATISKLESLRPSKQVNTLFTHLVKLCIPPSSIDIETLPQEVKTMRESLIKLCGKAEGLLELEFSTFISLTPNPMKNLTLFPYYGNYIKLANYENKILKENGVVNAKNVAFIGSGPMPLSSIILATHHMESTQFDNFDIDEKANEVASKIVASDKALEKRMKFVTQDIMEVKEKLGQYDCIFLAALVGMSRGEKMKVLGHIRKYMKEGGVLLVRSAKGSRAFLYPIVDENDVMDFEVLTIFHPTDDVINSVVLLQKPKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02573 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 240 IPR029063 -
Trre12g02573 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
Trre12g02573 284 CDD AdoMet_MTases 162 238 - -
Trre12g02573 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Trre12g02573 284 PANTHER NICOTIANAMINE SYNTHASE 3 15 282 IPR004298 GO:0030410|GO:0030418
Trre12g02573 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02573 Trre-Chr12 30547207 30548061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02573 17 281 Nicotianamine Synthase Gene Family AT5G56080 52.985 3.59e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02573 K05953 - gmx:100819726 462.996