Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02565 ATGGTTATTATGGGAATGGGAAATAGTAGCATCAACTTGTTGTTTCATCATGGGTCAATGTTGCCTCATGAACATGTAACTTCACTAGTGAGACCTGTGAGGGTATGTGCAAGTTTCCATTTGAATTCGGCAACTTGGGCTGTTAAAAGTACTAGTAAAGATCAAAGATGGAAAGGGTTTGTTAGAAGTTGTTCTGTTACTGAGTTTGTTATTGCTAGTGATGAAAAGTATGGCAATAAGCAGGTTGTTAGTCTTACGCCCCGGTTGTATGATTATGTCCTTGAAAATGTTCGGGAACCTGAGATTCTAAGGCAATTGCGAGTGGAGACAGCATCTATTCGAGGAAGCCAGATGCAGGTGTCTCCTGATCAGGCACAACTACTTGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTCGGCGTTTATACTGGTTACTCATCACTAGCCATAGCACTAGGCCTGCCAGAATCAGGTCGTTTAGTTGCATGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGCTTGCTGGTGTTTCACATAAGGTGGATGTAAAACTAGGACTTGCAGCAGATTCCCTAGAATCTCTAATTATGAATGGTGAAGCAGGAAGCTATGACTTTGCATTTATTGATGCCGAGAAAAGGATGACTGAGAAATATTTTGAGCTGCTACTACAATTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGATCCATTGGTAAATGACCCTAAAACTAACAGCATTAGAAATTTTAATCAACGGTTAATGGAAGACAAGCGTGTAAGCATCAGTATGGTGCCTATTGGAGATGGGATAACAATTTGTCGAAAAAGATGA 891 0.4063 MVIMGMGNSSINLLFHHGSMLPHEHVTSLVRPVRVCASFHLNSATWAVKSTSKDQRWKGFVRSCSVTEFVIASDEKYGNKQVVSLTPRLYDYVLENVREPEILRQLRVETASIRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALGLPESGRLVACERDAKSLDVAKKYYQLAGVSHKVDVKLGLAADSLESLIMNGEAGSYDFAFIDAEKRMTEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVNDPKTNSIRNFNQRLMEDKRVSISMVPIGDGITICRKR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02565 296 Gene3D Vaccinia Virus protein VP39 80 296 IPR029063 -
Trre12g02565 296 CDD AdoMet_MTases 139 244 - -
Trre12g02565 296 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 79 296 IPR002935 GO:0008171
Trre12g02565 296 Pfam O-methyltransferase 97 295 IPR002935 GO:0008171
Trre12g02565 296 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 88 296 IPR029063 -
Trre12g02565 296 PANTHER O-METHYLTRANSFERASE-RELATED 79 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02565 Trre-Chr12 30345113 30348733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02565 41 284 Monolignol Biosynthesis Gene Families AT3G62000 72.874 2.90e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02565 - - gmx:100776619 461.455