Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02537 ATGATGCATGTGCCATGGTTGGAAAAATTGTGGGCAATCACTACATTTTTTACAACTTGTGAAGTTCATCCAAACGATCCCAAAAATGAGTGTAACAAGTTCTGCATCGATTGCATTGACAATCCATTATGCGGGTCTTGCGTAAAATCTCATCACAGAGATCACAACGTAATCCAAATAAGGAGATCATCATATAATGAAAGGACTCGACCCCATCCTAAGAGGAGCAATATTGGTAAAATTGGTCACATTACCAACTATCTTTGTAAGACATGTGATAGAAATCTTGTGGATGCTTCTTGGTTTTGCTCTTTAGCATGCAAGTTTGAACATATAAAGAAGAATGGAGGCTTTCCTGTAAACCCAAAAGAAATGGAAGAAATGGAAAGTTTGTTGGAGAAATCGATCAAGGTATCACCACAAAAAGAAAAAGCTAAATGTTCACGTGAACAAAATCTAAAACGAAAAGTACATGAAGAAGGAATTGATGAAGAAAATGATGATGGTGAAGAGAAAGAAGGCAACAGAGAAAGTACCCTTCCTGTTAATTGTCCATCGGCTTCATTTCGTAAGCCAAGTTCAAGAAGAAAGGGAATACCTCATAGGGCTCCATTTTTTTAA 621 0.3704 MMHVPWLEKLWAITTFFTTCEVHPNDPKNECNKFCIDCIDNPLCGSCVKSHHRDHNVIQIRRSSYNERTRPHPKRSNIGKIGHITNYLCKTCDRNLVDASWFCSLACKFEHIKKNGGFPVNPKEMEEMESLLEKSIKVSPQKEKAKCSREQNLKRKVHEEGIDEENDDGEEKEGNRESTLPVNCPSASFRKPSSRRKGIPHRAPFF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02537 206 MobiDBLite consensus disorder prediction 140 162 - -
Trre12g02537 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 68 - -
Trre12g02537 206 Pfam PLATZ transcription factor 69 108 IPR006734 -
Trre12g02537 206 MobiDBLite consensus disorder prediction 140 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02537 Trre-Chr12 29597969 29599519 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre12g02537 PLATZ 5.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02537 - - cam:101499108 228.024