Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02525 ATGGATTTTTTTATTTCATTAGCGGGTAAAGTTGCTGAATATATGGTTGAACCTATTGGTCGTCAATTTGGTTACATACTCTACTACAAGGGAAACCTTGCAAAGATGAAAGCTGATGTCCAAAATTTAGAGGGAATAAAAGATATTGTGCAACACACTGTTGACGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCAAAACTGGTTGATCACAGTGGACAATACTAATGCTGAGGCAAACAAACTTATTCACACCGAAGACCATGCAAAAGCTCAATGTTCTATGGGGCACTTTTCAAATATGTGCACAAGATACAAGTTGAGTAGGAAGACCAAAAAGATGATACAGGAGATTTCTCAACTCCTAGCAGAAAGAAAATTTGACAGAATTTCTTACCGTGCTGCTTCTCATGTCACAGTACCACCGTTCCATAGAAGTTTTGAGGCCCTGCACTCCAGAACGTCAATGTTGAATGATATTATGTTGGCACTGAAGAATCCTAACATCTTCATTATTGGGGTGTATGGGATGGGTGGAGTGGGCAAGACTACACTAGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGATGGGTCATTTAGTGCTGTAGCTATGGCTACTATCACTTATTCTCCAGATGTGGAAAAAATTCAAGGTCAAATTGCTGATGCCTTGGATCTGAAATTTAACAAGGAGACCAAAGAAGGAAGAGCAGCACAATTACGGGAAAGAATAACCAAGGAGAAGAGTATTCTTGTTATTCTGGATGACATTTGGGGGAGATTTGATTTGACAGACCTGGGGGTTCCTTTTGGTAGTGATCACAAAGGATGCAAGTTGGTGGTAACATCCAGAGATCTTAATGTGTTGAACTGTGAGATTGGCACTCAAAAAGAATTTAGACTTGGAGTTTTACTTGAGGATGATAGTTGGAAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAGAATTCAATATAAAGCCAATTGCAGAGAAAGTGGCTAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTTACAGTGGCAAAGGCTTTGAGGAAAAAGGATGTCTCTGATTGGAAGGATGCCTTAAATGAATTAGAGAGATTTGATCAAGAAGGGTTGCATAAGAAAATGTATTCTACTCTGGAGTTGAGTTATAATTGTTTAGAGAGTGAGGAACTGAAGTTGCTATTCTTATTCATTGGTTCTTCTGGAGTAGACCATATCCATACCGGAGAATTGTTTTCATGTTCTTGGGGGTTTGGTATATATAGGCATGCTCGCACGTTGACACATGCAAGAAATAGATGCTACAAATTAATAAATGACCTCAAGGCCTCTTCATTGTTACTTGAGTCCAAAACTGAATTTGTTTACATGCATGATGTTGTTAGAGAGGTGGCTAAATCAATTGCCTCTAGGCTTCATCCTACCTATGGCGTGCAAAGGTATACTGTACTGAAAAAATGGCCAAAGATAGATCAGCTTCAAAAGTTAGATGCAATTGTTGTGCCTTGGTCTTACATTCACGAACTTCCTGAAAAGTTAGATTGCCCAGAGTTGAAACTACTTGTGCTTCAAACTATAGGTGACTATTTGAAAATCCCTGGTGAGTTTTTTTCTGTGACGAGAGAATTAAAGGTTCTTGATTTATATGGAATGATGTTGACACCTTCTCCACCTCATTCCCTCCACCTCTTGACAAACATTCAATCATTAGCTCTTTCTGGATGTGTGTTAGGAGACATATCAATAGTTGCAGAGCTGAAAAGTTTAGAGATTCTCAGCCTTGAAAAATCTGATATTATTGAACTTCCAAAGGAAATTGGACAACTAGATAATCTTCGGATGCTGAATCTAACCAGCTGCTCTCGACTCAGATTCATTCCTGCAAATCTTCTTTCAAGCTTGACGTGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGAATGTCAAGGGAAGCAAAGATCAAAGAAACAATGCAAGCCTAGATGAGCTAAGCAATTTGTCTCACCTAACAAGTTTAGACATTACAATTCAGGATGCTTCAGTCTGGCCAAGGGACTTGCAGATATTTGCAAAGCTTGAAAGATACAACATATTTATTGGTGACATGTGGAAATGGTCTTTGCAAATGGCTGGAGGTGCTTCTGAATCTTCAAGAACACTCAAGCTCACGGAGAGTGATAGTTCAAGCATTCTTTTGGACTCTGGGTTCAACTTCTTGTTGAATTCAGCTGAGGACATGTGCCTAGCTAGATTACAGTGTGGTAAAGATGTCCTTTTTGAACTAAACAAGGAAGGTTTTCCACAGGTAAAGCACTTATGCATTCAAGACAGTGCTGAGCTGAAGTTCATCATTAACTCAGTGGGGTGGATTCATCCTTATCCTGCTTTCCTCGGCTTAGAGACTTTGGTGCTTCAAAATCTGTTTAATTTGGAAGAAATATGCCATGGCCCAATTCCAATTCAATCTCTTACCAAATTAAAATCTATTGAAGTCAAAGGTTGTGAGAAGTTGAAGAGTCTGTTATGGCATTCCCTCGTTAGAGACCTTCCTCAACTTCTTGAAATAAAAATCTCTGATTGCAAAATGATTACAGAAATTGTAGCTGTGCAAACATCTGAAGCTGATAAAGAAATCAACAAGGTTATGTTCCCCAAGTTGCGTTCTCTTGAACTTGAATGTTTGCCGAGTCTTGTTAGTTTCTGTTCTGTGCCATTGACAGCTGGACAATCCACACCTTTGGGACTAATTGATAAAAAGGTTGGGATGCCCCACCTTGAACTCTTGAAGCTGTCTAATATCAACTCTAGGAAATTGTGGGATGTCAACCTTCCAGGTCATTCTTCCATTCAAAACTTGACGAGTTTGACAATTGACAAATGTGGCAGCATAGCTTACGCATTTTCGTCCTCAGTGGCTATAGAACTTCTAAACCTGCATTATCTTGGGATTAGTAATTGTGCAATGATGGAGGAGATATTTGTCTCGGATAGAAAGTTAGGTAGTCTTCCTTCTCAGAAACCATTGTCCGATGATGAGGTTATATTTCCAAACTTGGAGACATTGGAAATCTCCCACATGGAACACTTGAAGACAGTTTGGCACAATCAACTAGCTCCAAATTCCTTCTGCAAACTGAAGCAGTTGAAAATTGAATCCTGCAATAAATTATCAAATGTATTTCCATCCTATGTGCTTGATAAATTACAGAATTTGGAGACAGTGACTGTAAGTGATTGTCATGCACTGGAAGTTGTATTTGAAACTCAAGGTCTTAAAGCAGATGGTGGCAGACAAACGGGGCTAGAAATGAAATTGGGAACTCTCACTTTGAAACATTTACCCATGCTTAAACACATATGGAGTGGGAATCCTAATAAAATTTTGAACTTTCAAAACCTCTGCCAATTGAAAGTTATTGGATGCCAAAACCTTAATCATGTTTTTCCTCTCTCGGTGGCTAAAGAGCTTCAGCATCTCCAAGTGCTTCATATAGAAGAATGTGGCATAGAGATTATTGTAGCACAGGATGGAATCGCTGACACAACTCCAATGCTTAATTTTCCAAAATTAACAACTTTGTGTTTTCGAGAATTGACACAACTTCGAAGCTTCTATCATGTATCATATACCTTGAATTGTCCTGTTTTAAGGGATGTGGATGTGTTTCATTGTGACAATCTCATACTATTCCAGCCAAAGTCTTTATATAAATGTGACAATGTTTCAATTGATATATTACCCCTTCTCTCTATTGAAAAGGTTGTCACCAACACAAAGGAGCTTATTCTGACTTGCAAGGATGTCACCATGTTATGCAGCGGTCAACTTAATGATGAGTCTATCTACAAAGTTAAAGCTCTTTGCCTGCAATGTTTTCATGATGAGTCAGACAAGTTTCCATCTGATTTCCTCCAAAGATTTATCAATCTTGAAAATCTTAAGATGTCTTGTAGTTCTTTCACGGAGATTTTCTCAAGTGGAAGCTTTGGCACTGGACTTTCTGAAACAAAGGTGAAGTTGACAAAACTAGTACTTGTTGAATTAAATAACCTCGAGTTTATATGTAAAGAGAAATATGAGGTGCAAGTTCTTCAAAATATTGAAATATTGGAAGTATCTAAATGCTCTAGACTGAAAAATATAGTTCCATCCTCAGTGCTGTTTGGGAATTTAGAGAAGTTGATGGTAAGCTATTGTGCTGGATTAGAAAATATTATGAAATCTTCAGTGATCAATAATATACAAAAACTTAGAATATTATGCATAGATGGTTCTGAAAAGATAGAAGAAATAGTTGCAAGTGATGATGAGAACGATGCTTCTGAGCTTGCTTTTATGAAATTGGAGTATTTGCGATTGGATAACTTACCAAAGCTAAGAAGTTTTTGCAAGGGAAAACATAGCTTCAAATTTCCACTACTGCAGAGGTTACTTGTAATAGAGTGTCCTATGATGGAAACTTTCTCACATGGAGTCTTGAACGCACCAAAGCTCAGAGCAGTACATGTGAAGCGAAAAGATGAATGGCATTGGAATGGTGACATTAATTCTACTATAAGAAAATTTGTAGCAAAAAAAGGTAATGTATACAAAATGGATTATCTCCAATCATGA 4641 0.3805 MDFFISLAGKVAEYMVEPIGRQFGYILYYKGNLAKMKADVQNLEGIKDIVQHTVDEARRNGEEIENIVQNWLITVDNTNAEANKLIHTEDHAKAQCSMGHFSNMCTRYKLSRKTKKMIQEISQLLAERKFDRISYRAASHVTVPPFHRSFEALHSRTSMLNDIMLALKNPNIFIIGVYGMGGVGKTTLVKELAWQAENDGSFSAVAMATITYSPDVEKIQGQIADALDLKFNKETKEGRAAQLRERITKEKSILVILDDIWGRFDLTDLGVPFGSDHKGCKLVVTSRDLNVLNCEIGTQKEFRLGVLLEDDSWKLFEKMAGDVVQEFNIKPIAEKVAKCCAGLPLLIVTVAKALRKKDVSDWKDALNELERFDQEGLHKKMYSTLELSYNCLESEELKLLFLFIGSSGVDHIHTGELFSCSWGFGIYRHARTLTHARNRCYKLINDLKASSLLLESKTEFVYMHDVVREVAKSIASRLHPTYGVQRYTVLKKWPKIDQLQKLDAIVVPWSYIHELPEKLDCPELKLLVLQTIGDYLKIPGEFFSVTRELKVLDLYGMMLTPSPPHSLHLLTNIQSLALSGCVLGDISIVAELKSLEILSLEKSDIIELPKEIGQLDNLRMLNLTSCSRLRFIPANLLSSLTCLEELYMGNCFIQWNVKGSKDQRNNASLDELSNLSHLTSLDITIQDASVWPRDLQIFAKLERYNIFIGDMWKWSLQMAGGASESSRTLKLTESDSSSILLDSGFNFLLNSAEDMCLARLQCGKDVLFELNKEGFPQVKHLCIQDSAELKFIINSVGWIHPYPAFLGLETLVLQNLFNLEEICHGPIPIQSLTKLKSIEVKGCEKLKSLLWHSLVRDLPQLLEIKISDCKMITEIVAVQTSEADKEINKVMFPKLRSLELECLPSLVSFCSVPLTAGQSTPLGLIDKKVGMPHLELLKLSNINSRKLWDVNLPGHSSIQNLTSLTIDKCGSIAYAFSSSVAIELLNLHYLGISNCAMMEEIFVSDRKLGSLPSQKPLSDDEVIFPNLETLEISHMEHLKTVWHNQLAPNSFCKLKQLKIESCNKLSNVFPSYVLDKLQNLETVTVSDCHALEVVFETQGLKADGGRQTGLEMKLGTLTLKHLPMLKHIWSGNPNKILNFQNLCQLKVIGCQNLNHVFPLSVAKELQHLQVLHIEECGIEIIVAQDGIADTTPMLNFPKLTTLCFRELTQLRSFYHVSYTLNCPVLRDVDVFHCDNLILFQPKSLYKCDNVSIDILPLLSIEKVVTNTKELILTCKDVTMLCSGQLNDESIYKVKALCLQCFHDESDKFPSDFLQRFINLENLKMSCSSFTEIFSSGSFGTGLSETKVKLTKLVLVELNNLEFICKEKYEVQVLQNIEILEVSKCSRLKNIVPSSVLFGNLEKLMVSYCAGLENIMKSSVINNIQKLRILCIDGSEKIEEIVASDDENDASELAFMKLEYLRLDNLPKLRSFCKGKHSFKFPLLQRLLVIECPMMETFSHGVLNAPKLRAVHVKRKDEWHWNGDINSTIRKFVAKKGNVYKMDYLQS 1546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02525 1546 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1078 1239 - -
Trre12g02525 1546 SUPERFAMILY L domain-like 801 1242 - -
Trre12g02525 1546 PRINTS Disease resistance protein signature 613 629 - -
Trre12g02525 1546 PRINTS Disease resistance protein signature 340 354 - -
Trre12g02525 1546 PRINTS Disease resistance protein signature 174 189 - -
Trre12g02525 1546 PRINTS Disease resistance protein signature 247 261 - -
Trre12g02525 1546 Gene3D Ribonuclease Inhibitor 1259 1521 IPR032675 -
Trre12g02525 1546 Gene3D - 306 393 IPR042197 -
Trre12g02525 1546 SUPERFAMILY RNI-like 1291 1512 - -
Trre12g02525 1546 Gene3D Ribonuclease Inhibitor 509 990 IPR032675 -
Trre12g02525 1546 Gene3D - 132 300 IPR027417 -
Trre12g02525 1546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 404 IPR027417 -
Trre12g02525 1546 Gene3D Ribonuclease Inhibitor 991 1252 IPR032675 -
Trre12g02525 1546 FunFam Probable disease resistance protein At1g61300 145 299 - -
Trre12g02525 1546 SMART AAA_5 171 302 IPR003593 GO:0016887
Trre12g02525 1546 SUPERFAMILY L domain-like 463 907 - -
Trre12g02525 1546 Pfam NB-ARC domain 162 389 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02525 Trre-Chr12 29426098 29432249 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02525 168 477 WRKY Transcription Factor Family AT5G45050 26.462 3.14e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02525 - - mtr:25487104 2092.39