Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02511 ATGGACGTTGTTATTTCAGTTGTTGCTAAAATTGCTGAATTTACGATTGCACCTATTGGACGTCAATTTGGTTACATACTGTACTACAATGGCAACCTTAAAAGGATGAAAACTGATTTCGAAAAGATGGAGGGAATGAAAGACATTGTGCAACACAAAGTTGATGAGGCTAGAAGGAACGGGGAAAAGATTGAAATAATTGTTCAGAATTGGTTGGACGAAGTGGACAGCATTGTTGTTGAGGCAAAGAAACTCATTGACACTGATGGCCATGCCAAAGCTCATTGTTCTATGGGACACTTTCCCAATCTGTTAACAAGGCATCAACTCAGCAGGAAGACCAAAAAGATGTCGCAAGAGATTTCTCAAGTCATAGCAGATGGAAAATTTGACACAATTTCTTACCGTGTTCCTTCTGAAGTGACAGTCACGCCGTTTGGTAGAAATTATGAGGCCTTGGACTCTAGAACATCAATGTTGAATGAGATTATGGTGGACTTGAAGAATCCCAACATCTTCATTGTTGGGGTCTACGGAATGGGTGGTGTGGGGAAGACTACACTTGTGAAAGAGTTAGCATGGCAAGCAGAGAATGATAGGTTATTCAGTGTTGTAGCTATTGCTACTATAACTGTTTCTCCTGTTTTGGAAAAAATTCAAGGCCAAATTGCTTATGCTTTGGGTATGAAATTTGATAACGAGGTAGAAGAAGGAAGAGCAATGCAGTTACGTCAAAGGATAAGCAATGAGAAGAGTATTCTCATTATTCTTGATGACATTTGGGGTAAATTTGATTTGACAGAAGTGGGGATTCCTTTTGGTGATGATCACAAAGGATGCAAGTTGGTGGTGACATCCAGATATCTTAATGTGTTGAACTCTAATATGAGCATTCAGAAAGAATTCAGACTTGATGTTTTAAATTATGAAGATAGCTGGAAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAGATTTCAATATAAAACCAATTGCTGAAAAAGTGGCAAGCCGTTGTGTTGGTTTTCCCCTTTTGATTGTTACCGTTGCAACGGCTTTGAGGAAAAAAAATATCTATGACTGGCAAACCAAATTGAATGAGTTACAGAGACTTGATCAAGAAGAGCTACATGAGAAAATCCATTCTACTTTGAAATTGAGTTATAATTGGCTAGAAAGTGAAGAGCTAAAGTCACTTTTCTCATTCATTGGTTCATTTGGACTAGAGCGCCTGCACACTGAAGATTTGTTTTCATGTTATTGGGGGTTAGGCTTATATAGACACTCTCACTCATTGACAGGTGCAAGAACCAGATTCTACAAATTAATAAACGACCTCAAGGCCTCTTCGTTGTTACTTGAGTCTGAACCTGAAATGATTAGAATTCATGATGTTGTTAGAGATCTGGCTAAAACAATTTCATCTAGGACTCGGCCAACATATGTTGAGAAAATGTACACTTTGGTAAAACAGTTTCCAGATATGGATGAGCTTCAAAAATACCATCAGATCGTCGTGCATCCGTCATATATTTACAAGCTTCCTGAGAAGTTGGATTGCCCAGAGTTGAAGCTACTCGAACTTGATAATATAGATTATTTGAAAGTCCCTGATGACTTCTTCTCCGGTATGGGAGAGGTAAAGGTCATTGTTTTATCTGGAATGATGTTAACCCCTTCTCTACCACCATCTTTGTGTCTCTTGACAAAAATCCAATCATTGGATATGTCTGATTGTGTGTTGGAAGACATATCAATAGTTGCAGAACTAAAAAGTTTAGAGATTCTCATCCTTGAAAGATCAGATATTAAAGAGCTCCCAAAAGAAATAGGGCAACTAACTAATCTTCGAATGCTAAAACTAACCAACTGTTGTGGACTGAGATTCATTCCTGCAAATCTTATTTCAAGTTTAACCTGCTTAGAAGAGTTGTACATGGGGAATTGCTTTATCAATTGGGATGTCAAGGGAAACACATATCAAAGCAGCAACAATGCAAGTCTAGATGAGCTGGGGAATTTGTCTCATCTAAGTGCTTTAGACATAACAATTCAAGAAGCTTCAGTTTGGCCAAGGGACTTGCAGTTCCTTGCCAAGCTTGAAAGATACAATATATATGTAGGTGATATGTGGAAATGGTCTTTGAAGTGGTCTAGAAATACTTCTGAAACATCAAGAAATCTTAAGCTCACCGACAATAGGAATTCAAGCATTCTTATGGATCGTGGGTTTAACTTCTTGTTAAATTCAGCTGAGGGCATGTGCCTTAATAACATACAATGTGTTAGAAATGTCCTTTATGAACTGAATAGAGAAGGTTTTCCTCAAGTAAAGCATTTGTGCATTCAAGACAGTAGTGAACTACAGTATATCGTCAGCTCAATGGGGTTGGTTCATCCTTATCCTGCTTTACCCAACTTAGAGACTTTGACTCTTCAAAATCTATTTAGTTTGGAAGAAATATGCCATGGCCCAACTCCAATTCATTCTTTTACCAAACTAAAATCTTTTGAAGTTAAAGGTTGCCACAAGTTGACAAATTTATTATGGTATTCCCTTGGTAGAGACCTTCCTCAACTTCTTGAAATAAAAATTTCTGATTGCAAAATGATTACGGAAGTAATAGTTTTCCAAATATCTGAGGTTGATATTGAAATCAGCAAGATTATGTTCCCCAAGTTGCGCTCTCTCGAACTTCAGCATTTGCCAAGTCTTGTTAGTTTCTGTTCCGTGCCATTGGCAGCGGATAAGCATCTCAAAAAGTGCATACCTGTGGCACTAATTGATCGAAAGGTTGAGATGCCTCACCTTGAACTCTTGAAGCTGTCTAATATCAACTCTAGAAAATTGTGGGGTGACACCCTTCCGGGTCATTCTTTCATTCAGAACTTGAAGCATCTTCAGATCAGTAATTGTCAAAGGCTGGAGGAAATATTTGTCTCAGATGGAAGCATGTCGTCCTCGGTTGTATTTCCAAACTTGGAGACATTGGAAATCTCCCACATGGTGTTGCACTGA 3021 0.3827 MDVVISVVAKIAEFTIAPIGRQFGYILYYNGNLKRMKTDFEKMEGMKDIVQHKVDEARRNGEKIEIIVQNWLDEVDSIVVEAKKLIDTDGHAKAHCSMGHFPNLLTRHQLSRKTKKMSQEISQVIADGKFDTISYRVPSEVTVTPFGRNYEALDSRTSMLNEIMVDLKNPNIFIVGVYGMGGVGKTTLVKELAWQAENDRLFSVVAIATITVSPVLEKIQGQIAYALGMKFDNEVEEGRAMQLRQRISNEKSILIILDDIWGKFDLTEVGIPFGDDHKGCKLVVTSRYLNVLNSNMSIQKEFRLDVLNYEDSWKLFEKMAGDVVQDFNIKPIAEKVASRCVGFPLLIVTVATALRKKNIYDWQTKLNELQRLDQEELHEKIHSTLKLSYNWLESEELKSLFSFIGSFGLERLHTEDLFSCYWGLGLYRHSHSLTGARTRFYKLINDLKASSLLLESEPEMIRIHDVVRDLAKTISSRTRPTYVEKMYTLVKQFPDMDELQKYHQIVVHPSYIYKLPEKLDCPELKLLELDNIDYLKVPDDFFSGMGEVKVIVLSGMMLTPSLPPSLCLLTKIQSLDMSDCVLEDISIVAELKSLEILILERSDIKELPKEIGQLTNLRMLKLTNCCGLRFIPANLISSLTCLEELYMGNCFINWDVKGNTYQSSNNASLDELGNLSHLSALDITIQEASVWPRDLQFLAKLERYNIYVGDMWKWSLKWSRNTSETSRNLKLTDNRNSSILMDRGFNFLLNSAEGMCLNNIQCVRNVLYELNREGFPQVKHLCIQDSSELQYIVSSMGLVHPYPALPNLETLTLQNLFSLEEICHGPTPIHSFTKLKSFEVKGCHKLTNLLWYSLGRDLPQLLEIKISDCKMITEVIVFQISEVDIEISKIMFPKLRSLELQHLPSLVSFCSVPLAADKHLKKCIPVALIDRKVEMPHLELLKLSNINSRKLWGDTLPGHSFIQNLKHLQISNCQRLEEIFVSDGSMSSSVVFPNLETLEISHMVLH 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02511 1006 Gene3D - 132 300 IPR027417 -
Trre12g02511 1006 Gene3D Ribonuclease Inhibitor 506 1006 IPR032675 -
Trre12g02511 1006 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 19 946 - -
Trre12g02511 1006 SUPERFAMILY L domain-like 462 1002 - -
Trre12g02511 1006 Pfam NB-ARC domain 159 390 IPR002182 GO:0043531
Trre12g02511 1006 Gene3D - 306 393 IPR042197 -
Trre12g02511 1006 PRINTS Disease resistance protein signature 174 189 - -
Trre12g02511 1006 PRINTS Disease resistance protein signature 340 354 - -
Trre12g02511 1006 PRINTS Disease resistance protein signature 960 976 - -
Trre12g02511 1006 PRINTS Disease resistance protein signature 247 261 - -
Trre12g02511 1006 FunFam Probable disease resistance protein At1g61300 148 300 - -
Trre12g02511 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 404 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02511 Trre-Chr12 29262353 29265715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02511 162 481 WRKY Transcription Factor Family AT5G45050 25.680 5.48e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02511 - - mtr:120578393 1350.88