Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02498 ATGACCGAAAAAGACAAACTCGGAGCCTCCGCCGGCCACCCTCCTCCGCCGCAATCTCAACCCTTTCCACCTCCTCAGTACGGTACTTTCCAAGGTGTCTCCAACTTCCCTCCTCCTCTTCCTCCTCACACCAACCAATACCCTGCCATCGGTTTCCCTCAACCCGTCCCCCCTCCCGGCTCCGACCCCTCCGCCCCTCCTCCTCCCTATTACCCTCATGGCTACCAAGCTTTTCCCGGTTATGCAGTTGCTGAAGGAAGACCTGTGAGAGAAAGGCGACTTGGGTGTTGTGGTATTGGTTGTGGTTGGTGCCTGTTTGTAATGGGTTTCTTTCTCGCTGCTATTCCATGGTATGTTGGGGCAATAATTGTTCTTTTTTCCAGAGTAGACTACCGAGAGAAACCTGGATACATTGCTTGTTTGATTGCTGCTATTGTGGCTACAATCGCGATTGTTCTTGGCGCAACAAATGTAGCAGATGACTGGTAA 489 0.5194 MTEKDKLGASAGHPPPPQSQPFPPPQYGTFQGVSNFPPPLPPHTNQYPAIGFPQPVPPPGSDPSAPPPPYYPHGYQAFPGYAVAEGRPVRERRLGCCGIGCGWCLFVMGFFLAAIPWYVGAIIVLFSRVDYREKPGYIACLIAAIVATIAIVLGATNVADDW 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02498 162 MobiDBLite consensus disorder prediction 35 70 - -
Trre12g02498 162 MobiDBLite consensus disorder prediction 1 70 - -
Trre12g02498 162 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 20 162 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02498 Trre-Chr12 29127553 29131197 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02498 27 162 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 36.364 4.02e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02498 - - gmx:100810998 186.808