LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre12g02495	ATGACAATATCTCCTGGATTTGTTTTCGATCCGCCGGAGATCTACGAATTTCTTGGCTTTGTGTTTGAATATCAGGAAGGAGGCAGCTTGGGCAATTCTGATGCCATATCCGGTGCTAGCAAGGAGGAACATATCAAGTATTTGAAAGAAAAATGTGTCAAGGCTTTGTGGAATTTTCCGACAGTATTCAGTGATTATTTAGATATTGTTTACACATGTCTAAAAGCATTAGTAAAATTGGAAGTGGTGAAGGTCTACAACAGCAATGATGACAAATCAGATGGAAGTAGAATAGATTGTTATATAGATGGGAGTAGAACTGTCAAGATAAGATGGACTATTTACTTTCAAGGACCGAAACTTGTTTGGTGGCTCTATGACCATGTTGGAACTGCTTCATCACTAGTTAGTTCTCATCATTCTTTGGATATTTCCTCTGCTTTCTGGTTTGTAATGGGTTTTTTTCTCGCTGCTATTCCGTGGTATGTTGGGGCAATAATTGTTCTTTTTTCCAGAGTAGATTACCGAGAGAAACCTGGATACATTGCTTGTTTGATTGCTGCTATTGTGGCTACAATCGCAATTGTTCTTGGCGCAACAAATGTAGCAGATGACTGGTAA	621	0.3881	MTISPGFVFDPPEIYEFLGFVFEYQEGGSLGNSDAISGASKEEHIKYLKEKCVKALWNFPTVFSDYLDIVYTCLKALVKLEVVKVYNSNDDKSDGSRIDCYIDGSRTVKIRWTIYFQGPKLVWWLYDHVGTASSLVSSHHSLDISSAFWFVMGFFLAAIPWYVGAIIVLFSRVDYREKPGYIACLIAAIVATIAIVLGATNVADDW	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre12g02495	206	PANTHER	60S RIBOSOMAL PROTEIN L18A-LIKE	148	206	IPR044804	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre12g02495	Trre-Chr12	28907345	28916685	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre12g02495	105	206	Cytoplasmic Ribosomal Protein Gene Family	AT1G29970	39.216	1.09e-16	73.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre12g02495	-		-	mof:131144787	84.7297