Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02485 ATGAATAAGCTGCTTATGGAGGAGAATGATAGGTTGCAGAAACAAGTTTCTCATTTGGTGTATGAAAATGGCTACTTTCGCCAACATACTCAAAATACTAATATTGCAACCAAAGACACAAGCTGTGATTCAGCGGTGACTAGTGGTCAATGCAGTTTGACAGCCCAGCATCCCCCAAGGGATGCAAGTCCTGCAGGACTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGACTTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGGTAATCTAA 297 0.4276 MNKLLMEENDRLQKQVSHLVYENGYFRQHTQNTNIATKDTSCDSAVTSGQCSLTAQHPPRDASPAGLLSIAEETLAEFLSKATGLAVEWVQMPGMKVI 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02485 98 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 96 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02485 Trre-Chr12 28794144 28794728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02485 1 96 Homeobox Transcription Factor Family AT4G32880 83.505 1.49e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02485 K09338 - jre:109011208 181.415