Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02481 ATGGCAACAACTACAGCAATAATTCTCTTCACCTTGATGATACTTGTTTTGACATGGGCATGGAGGATTTTGAATTGGGTATGGTTTAAGCCAAAGAAGCTAGAAAAATTACTAAGAGAACAAGGACTTAAAGGGAATTCATATAGATTTTTAGTTGGAGACATAATAGATATTCTTAAGATACGAAATGAAGCAACATCTAAACCTATGAATCTTTCTGATGATATTGCTCCTCGTGTGTATTCCTATGTCCATCAAAGTCATGAAAAACATGGGAAGAATTCTTTTCTCTGGCTTGGACCAGTACCAAGGTTGAATATCGCAGATCCAGAGCTAATTAAAGATGTACTTAACAAATACTACGAGTTCCGAAAGCCAGATGCAAATCCGCTTGTCAAGTTACTAATTAAAGGTCTTGTAAATCTCGAGGGAGATCAGTGGACCAAACACAGAAAGATAATAAATCCTGCATTCCATGTAGAAAAACTAAAGATCATGTTACCAATATTCTTCAAAAGTTGCGATGATCTGATTAAAAAATGGGAGACAATTTTGTCATCAGATGAATCATGTGAAATGGATGTATGGCCTTTCCTTCAAAACATGGCAAGTGATGTTATTGCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGGCGAAGAATATTTCAACTTCAAATCGAGCAAGCTGAACTTACAAAAACAGTTATGTTTAAAGCTTACATCCCTGGATGGAGGTTTCTACCTACTCCTACCCATAGGAGGATGAAGAAAATTGCCAGAGAAGTTAAGGCTTCCCTTACCGATATGATTAACAAGAGAGAGAGCGCACTAAAAGCAGGTGAAGCAACTCAGGACGATTTATTAGGTATACTTTTGGAATCCAATCACAAAGAAATGAAAGAAAACGACAACAATAAGAATGTTGGAATGAATCTTGAAGATGTAATAGAGGAATGCAAGCTATTCTACTTCGCAGGGCAAGAGACCACTTCGGTTTTGCTTGTTTGGACAATGGTGTTGTTGAGTAGGTACCGCGACTGGCAAGCACGTGCAAGGGAGGAAGTATTGCAAGTCTTCGGCAACAAAAAACCAGATTTTGATGGCCTAGGTCATCTTAAGATTGTAACCATGATTTTGTACGAGGTTCTTAGGTTATACCCACCGGTAATCGCGCTAAGTCGAACTGCATATAACGATGTGAAACTCGGAAACTTATCATTACCCGCCGGAGTGCAGCTTTTCTTATCGGTAATTTTGGTTCACCATGATGTAGAAATATGGGGTGATGATGCTAAGGTGTTCAATCCTGAGAGATTTTCCGAAGGTGTTTTAAAAGCAACAAATGGAAAAAACGCATTTTTTCCATTTGGAGGCGGTCCAAGAATATGCATTGGACAAAACTTTTCCATATTGGAAGCAAAGTTAGCAATATCAATGATTTTACAACATTTCTCATTCGAGCTTTCACCAACCTATGCTCATGCCCCTGCTACGGTAGTTACGCTTCAACCGCAACATGGTGCTCATATAATTATGCGTAAATTATAA 1551 0.3836 MATTTAIILFTLMILVLTWAWRILNWVWFKPKKLEKLLREQGLKGNSYRFLVGDIIDILKIRNEATSKPMNLSDDIAPRVYSYVHQSHEKHGKNSFLWLGPVPRLNIADPELIKDVLNKYYEFRKPDANPLVKLLIKGLVNLEGDQWTKHRKIINPAFHVEKLKIMLPIFFKSCDDLIKKWETILSSDESCEMDVWPFLQNMASDVIARTAFGSSYEEGRRIFQLQIEQAELTKTVMFKAYIPGWRFLPTPTHRRMKKIAREVKASLTDMINKRESALKAGEATQDDLLGILLESNHKEMKENDNNKNVGMNLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYRDWQARAREEVLQVFGNKKPDFDGLGHLKIVTMILYEVLRLYPPVIALSRTAYNDVKLGNLSLPAGVQLFLSVILVHHDVEIWGDDAKVFNPERFSEGVLKATNGKNAFFPFGGGPRICIGQNFSILEAKLAISMILQHFSFELSPTYAHAPATVVTLQPQHGAHIIMRKL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02481 516 CDD CYP72 82 512 - -
Trre12g02481 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 509 - -
Trre12g02481 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Trre12g02481 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 SUPERFAMILY Cytochrome P450 78 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 Gene3D Cytochrome P450 27 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 FunFam Cytochrome P450 734A1 28 516 - -
Trre12g02481 516 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02481 516 Pfam Cytochrome P450 80 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02481 Trre-Chr12 28742569 28750939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02481 1 516 Cytochrome P450 AT3G14690 56.371 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02481 - K23809 gmx:100777623 803.897