Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02441 ATGGCCATGGACGCTGTTATTTCATTTGCTGCTAAAATTGCTGAATTTACGATTGCACCTATTGGACGTCAATTTGGTTACATATTGTACTACAAGGGCAACCTTGAAAGGGTAAAAAATGATTTCCAAAAGATGGAGGGAATGAAAGACATTGTGCAACACAAAGTTGACGAGGCTAGAAGGAACGGAGAAGAGATTGAAATAATTGTCCAAAACTGGTTGAACAAAGTCGACTACACAGTTGTTGAGGCAAAGAAACTCATTGACACCGAAGGCCATGCAAAAGCTCAATGTTCTATGGGACACTTTCCCAATCTGTTCACTAGGCATCAACTCAGCAGGAAGACCAAAAAGATGTCGCAAGAGATTTCTCAAGTCATAGCAGAAGGAAAATTTGAAACAATTTCTTACCGTGTTCCTGCTCAAGTAACAGTCACGCCGTTTGGCAGAGGTTATGAGGCTTTGGACTCTAGAACATCAATGTTGAATGAGATTTTGTTGGACTTGAAGAATCCCAACATCTTCATTGTTGGGGTCTACGGGATGGGTGGTGCGGGGAAGACAACACTTGTGAAAGAGTTAGCATGGCAAGCAGAGAATGATAGGTTATTTAGTGTTGTAGTTATGGCTACTATAACCGATTCTCCGGATTTGGGAAAAATTCAAGGCCAAATTGCTGATACTTTGGATATGAAATTTAAGAAGGAGACAAAAGAAGGAAGAGCAATGCAATTACGTCAAAGGATAATCAATGAGAAGAGTATTCTCGTTATTCTTGATGACATTTGGGGTAAACTTGATTTGACAGAAGTGGGGATTCCTTTTGGTGATGATCACAAAGGATGCAAGTTGGTGGTGACATCCAGAGATCGTAATGTGTTGAATTCTGAGATGGGCATTCAGAAGGAATTCAGACTTGAAGTTTTACTTGAGGGGGATAGTTGGAAATTGTTTGAGAAAATAGCAGGTGATGTTGTTCAAGATTTCAATATAAAACCAATTGCAGTAGAAGTTGCCAAACTTTGTGCTGGGTTGCCCCTTTTGATAGTTACAGTGGCAAAGGCTTTGAGGAAAAAGCATGTCTCTGATTGGAAGGATGCCTTAAACGAATTAAAGCGATTTGATCAAGAAGGGTTGCATAATAAAGTTTACTCTACTCTGGAATTGAGTTATAATTTTTTAGAGAGAGAGGAGCTGAAGTTGCTATTCTTATTCATTGGTTCCTTTGGATTAGATTACATGTACATTGGAGACCTGTTTTTACGTTATTGGGGGTTAGGCTTATATGGATACTCTGGCACATTGACTGATGCAAGAACCAGATACTACAAACTAATAAACGACCTCAAGGCCTCTTCGTTGTTACTTGAGTCTGAACCTGAATTGATTAGAATTCATGATGTTGTTAGAGATGTGGCTAAATCAATTTCATCTAGGACTCGACCAACCTATAGCGTGTCAAGGTTCACTTTGATACAACAATTTCCAGAGATGGAGCAGCTTCGAAAATGCCATCAGATCATCATGCCTTGGTCTTATATTCACAAGCTTCCTGGGATGCTGGATTGCCCAGAGTTGAAGCTACTTCTACTTCATAATATAGCTGATTATTTGAAAGTCCCCGATGACTTCTTCTCCGAGATGGGAGAGCTAAAGGTAATTGATTTATATGGAATGATGTTAACCCCTTCTCCACCACCATCTCTTTGTCTATTGACAAAAATCCAAACATTGGTTCTTTCTAGATGTATGTTAGAAGACATATCAATAGTTGCAAAGCTGAAAAGTTTAGAGATTCTCAAACTTGAAAGATCTGATATTAAGGAGCTCCCAAAAGAAATAGGACAACTAACTAAGCTTCGAATTTTGAATTTAACCAACTGCTTTGGATTGAGATTCATTCCTGCAAATCTTATTTCAAGCTTAACCTGCTTAGAAGAGTTGTACATGGGGAATTGCTTTATCAATTGGAATGTCAAAGGAAGCAAAGACCAAAGCAACAATGCAAGTCTAGATGAGCTGGGGAATTTGTCTCATCTAACTGCTTTAGACATAACAATTCAAGATGCTTCAGTTTGGCCAAGGGACTTGCAGGTCCTTGCCAAGCTTGAAAGATACAACATATATGTAGGTGATATGTGGAAGTGGTCTTTGGGCTGGTCTGGAAATGCTTCTAAAACTTCAAGAAATCTTAAGATCAACAACAATAAGAGTCCAAGCATTCTTTTAGATCGTGGGTTTAACTTCTTATTAAATTCAGCCGAGGACATGTGCCTTAATAACATACAATGTTTTAGCAATGTCATTTATGAACTAAATAGGGAAGGTTTTCCGCAAGTAAAGAATTTGTGCATTCAAGATAGTACTGAACTGCAGTACATCGTCAACTCAATGGGGTTGGTTCATCCTCATCCGGCTTTACGCAACTTAGAGACTTTGGCTCTTCAAAATCTATTTAGTCTAGAAGAAATATGCCATGGCCAAACTCCAATTCATTCTTTTACCAAACTAAAATATTTTGAAGTTGAAGGTTGCCACAAGTTGACAAAGTTGTTATGGTATTCCCTCGTCAAAAACCTTCCTCAACTTCTTGAAATAAAAATTTTTGATTGCAAAATGATTACGGAAGTAATAGTTTTCCAAATATCTGAGGTTGATATTGAAATCAACAAGATTATGTTCCCCAAGTTGCGCTCTCTTGAACTTGAGCATTTGCCAAGTCTTATTAGTTTCTGTTCTGTGCCATTGGCAGCTGATAAGCATCTCAAAAAGTGTGGGGAAAATTATGATGATACACAGTGCGTACCTGTGGCACTAATTGATCAAAAGGTTGAGATGCCTCACCTTGAACTCTTGAAGCTGTCTAACATCAACTCTAGGAAATTGTGGGATGACAACCTTCCAGGTCATTCTTTCGTTCAAAACTTGACGAGTTTGACAATTGACAAATGTGTTAGCATAACATACGCGTTCTCGTCCTCAGTGGCTAGAGATGTTGTAAACTTGAAGCATCTTTGGATTAGTAATTGCCAAAGGCTGGAGGAGATATTTGTCTCAGATGGAAAGTTTGGCAATGTTTCCAACTCGGTTGTATTTCCAAATTTGGAGACATTGGAAATCTCTCACATGGAACACTTGAAGTCATTATGGCACAATCAACTAGCTCCAAACTCCTTCTGCAAATTGAAGCAATTGGAAATTCAATCCTGCAATAAACTATCAAATGTATTTCCATCTTATGTGCTTGATAAATTACAGAATCTGGAGAAACTGACTGTAACTGATTGTCCTGCGCTAGAAGTTGTATTCGAAACACAAAGTCTACAAGTAGAAGGTGGTAAACAAATGAGGCTGGAAATGCAATTGGGAACTCTCATTTTGGAAAATTTACCGAAGCTGAAACATATATGGAGTGGGAATCCTAATGAAAGCTTCAAGTTTCAAAACCTATGCATACTGAATGTTATGGACTGTGAAAGCCTTAATCATGTTTTTTCCCTTTCTTTGGCTAAAGAGCTTCAGCATCTCCAAGAGCTTTGCATTAGATCATGTGGTGTAGAAAGCATTGTAGCACGGGACGAAATGGCGAACACAAGTTCAAATCCGATACTGATTTTCCCAGAATTAAAATTTCTGAAGTTTGAATTTTTGCAACAACTTCAAAACTTCTACCCTGGATTATATACCTTTGATTGTCCTGTCTTAAGAAACGTGGATGTGTTTCATTGTGACAAGCTCGTACTATTCGAGTCAATGTCTCAATTAAACTACCAAGACAATGTCACAGTTGATATACCACCCCTTCTCTCAATTGAAAAGGTTGTCTCCAAGACAAGTAAGCTTATTCTGAATTGCAAGGATGTCACCATGTTATGCAATGGTCAACTTAATGATGAGCCTATCTACACAGTAAAAGATCTTAGCCTACGATGTTTTCATGATGTGTTAGACAAATTTCCATCTGGTTTCCTCCAAAGATTTATCAATCTTGAAAATCTTGAGGTGATATGTAGTTCTTTCACAGAGGTTTTGTTGAGTGAAAGCTTTGGCACTGTACATTCTGAAGCAACTATGAAGTTGAGAAGACTAAAACTTGATAGATTACAAAACCTCAAGTTTATATGTAGAGAAAAATCTGAGGGACAACTGGTTCTTCAAAATATGGAATATTTGTCTGTATATTTATGCTCTAAACTGAAGAATATATTTCCATCCTCAATGGTATTTGAGAATTTACAGGAGTTAGTGGTGATCGATTGTGATGGATTGGAAAATATTTTGAAATCATCAACAGCTACCAGTTTACAAAAACTTAGAGAATTACACATATATGATTGTGAAATAATAGAAGAAATAGTTGCAAGTGATGATGGGAATGATACTTCTGAGCTAGTTTTTATGAAGTTGGACACTCTAATGCTGAGTAACTTACCAAGGCTAAGAAGTTTTTGCAAGGGAAGACATGACTTTAAATTTCCACTACTTTATGAGTTAATTGTAAAAGATTGTCCCATGATGGAAACTTTCTCACATGGAGTGTTGAATGCGCCAAGGATCAGAAAAGTACGTGTAAATAACAAAGACAGTGATGAATGGTATTGGAATGGTGACATAAATTCTACTATAGGAAAAATTGTAGCGAAAAAAAGGTAA 4653 0.3752 MAMDAVISFAAKIAEFTIAPIGRQFGYILYYKGNLERVKNDFQKMEGMKDIVQHKVDEARRNGEEIEIIVQNWLNKVDYTVVEAKKLIDTEGHAKAQCSMGHFPNLFTRHQLSRKTKKMSQEISQVIAEGKFETISYRVPAQVTVTPFGRGYEALDSRTSMLNEILLDLKNPNIFIVGVYGMGGAGKTTLVKELAWQAENDRLFSVVVMATITDSPDLGKIQGQIADTLDMKFKKETKEGRAMQLRQRIINEKSILVILDDIWGKLDLTEVGIPFGDDHKGCKLVVTSRDRNVLNSEMGIQKEFRLEVLLEGDSWKLFEKIAGDVVQDFNIKPIAVEVAKLCAGLPLLIVTVAKALRKKHVSDWKDALNELKRFDQEGLHNKVYSTLELSYNFLEREELKLLFLFIGSFGLDYMYIGDLFLRYWGLGLYGYSGTLTDARTRYYKLINDLKASSLLLESEPELIRIHDVVRDVAKSISSRTRPTYSVSRFTLIQQFPEMEQLRKCHQIIMPWSYIHKLPGMLDCPELKLLLLHNIADYLKVPDDFFSEMGELKVIDLYGMMLTPSPPPSLCLLTKIQTLVLSRCMLEDISIVAKLKSLEILKLERSDIKELPKEIGQLTKLRILNLTNCFGLRFIPANLISSLTCLEELYMGNCFINWNVKGSKDQSNNASLDELGNLSHLTALDITIQDASVWPRDLQVLAKLERYNIYVGDMWKWSLGWSGNASKTSRNLKINNNKSPSILLDRGFNFLLNSAEDMCLNNIQCFSNVIYELNREGFPQVKNLCIQDSTELQYIVNSMGLVHPHPALRNLETLALQNLFSLEEICHGQTPIHSFTKLKYFEVEGCHKLTKLLWYSLVKNLPQLLEIKIFDCKMITEVIVFQISEVDIEINKIMFPKLRSLELEHLPSLISFCSVPLAADKHLKKCGENYDDTQCVPVALIDQKVEMPHLELLKLSNINSRKLWDDNLPGHSFVQNLTSLTIDKCVSITYAFSSSVARDVVNLKHLWISNCQRLEEIFVSDGKFGNVSNSVVFPNLETLEISHMEHLKSLWHNQLAPNSFCKLKQLEIQSCNKLSNVFPSYVLDKLQNLEKLTVTDCPALEVVFETQSLQVEGGKQMRLEMQLGTLILENLPKLKHIWSGNPNESFKFQNLCILNVMDCESLNHVFSLSLAKELQHLQELCIRSCGVESIVARDEMANTSSNPILIFPELKFLKFEFLQQLQNFYPGLYTFDCPVLRNVDVFHCDKLVLFESMSQLNYQDNVTVDIPPLLSIEKVVSKTSKLILNCKDVTMLCNGQLNDEPIYTVKDLSLRCFHDVLDKFPSGFLQRFINLENLEVICSSFTEVLLSESFGTVHSEATMKLRRLKLDRLQNLKFICREKSEGQLVLQNMEYLSVYLCSKLKNIFPSSMVFENLQELVVIDCDGLENILKSSTATSLQKLRELHIYDCEIIEEIVASDDGNDTSELVFMKLDTLMLSNLPRLRSFCKGRHDFKFPLLYELIVKDCPMMETFSHGVLNAPRIRKVRVNNKDSDEWYWNGDINSTIGKIVAKKR 1550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02441 1550 SUPERFAMILY RNI-like 945 1100 - -
Trre12g02441 1550 Gene3D - 309 395 IPR042197 -
Trre12g02441 1550 Gene3D Ribonuclease Inhibitor 729 937 IPR032675 -
Trre12g02441 1550 Gene3D Ribonuclease Inhibitor 474 698 IPR032675 -
Trre12g02441 1550 SMART AAA_5 173 314 IPR003593 GO:0016887
Trre12g02441 1550 PRINTS Disease resistance protein signature 249 263 - -
Trre12g02441 1550 PRINTS Disease resistance protein signature 342 356 - -
Trre12g02441 1550 PRINTS Disease resistance protein signature 615 631 - -
Trre12g02441 1550 PRINTS Disease resistance protein signature 176 191 - -
Trre12g02441 1550 Pfam NB-ARC domain 163 392 IPR002182 GO:0043531
Trre12g02441 1550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 406 IPR027417 -
Trre12g02441 1550 SUPERFAMILY RNI-like 1126 1256 - -
Trre12g02441 1550 Gene3D - 133 300 IPR027417 -
Trre12g02441 1550 Gene3D Ribonuclease Inhibitor 938 1269 IPR032675 -
Trre12g02441 1550 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1272 1514 - -
Trre12g02441 1550 FunFam Probable disease resistance protein At1g61300 152 303 - -
Trre12g02441 1550 SUPERFAMILY L domain-like 464 912 - -
Trre12g02441 1550 Gene3D Ribonuclease Inhibitor 1276 1527 IPR032675 -
Trre12g02441 1550 SUPERFAMILY RNI-like 1304 1524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02441 Trre-Chr12 28063302 28068469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02441 152 489 WRKY Transcription Factor Family AT5G45050 27.350 1.04e-08 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02441 - - mtr:25487104 2042.31