Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02428 ATGATATTGCCTCCTAATAGGAAACAATCAAAACTTGAACTATTGCTCCCATGTTTGTTAGAGGTTGTGGCCAAAGATCACAAGATGATGCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACAACAACGTCTTGAAATGCAACAAGAGACAGAAAAGATTGCTGAAGAGGCAGCAGAACAAACGCATCTTGCTGAAATAAGCAATGCTGAAGAGGCAGCAGAACAAATTGCGGAAAAAGAACACGAAGAAGCTGAAGAGCGTAGAAAACTGGAGTTGTTTTTGACTAAACAAACAACTCCGGAAGAGACAAGAAATGAAGAAGAAATGGCAGAAATTAGCTACAACCATGGATTATTTGGAAAAAGCAAAGAGAGAAGAGGCTGCTCTGCTTATCGAAGCGGCATATCAACAACAAGAGGTTGA 438 0.395 MILPPNRKQSKLELLLPCLLEVVAKDHKMMLARKSIIEKRKEEQEQQRLEMQQETEKIAEEAAEQTHLAEISNAEEAAEQIAEKEHEEAEERRKLELFLTKQTTPEETRNEEEMAEISYNHGLFGKSKERRGCSAYRSGISTTRG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02428 145 Coils Coil 71 94 - -
Trre12g02428 145 Coils Coil 32 64 - -
Trre12g02428 145 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02428 Trre-Chr12 27961549 27962268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02428 1 72 Eukaryotic Initiation Factors Gene Family AT4G11420 48.101 1.67e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02428 - K16469 masw:AM586_16480 33.113