Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02419 ATGGAAGAAGAAACAACCGAATCAAGAAAACAAGCAAGGCTAGCAATTCTAGAACTAGCAAACATGATAAGCGTACCTATGTCCTTAAACGCCGTCGTACGTCTCAATGTTGCCGATGCAATTTGGGAAGGTGGATCAAACGCGCCTCTTACCGCCGCTCAGATCCTCGCACGTGTAATTCCTGACCGTAGCGGTGACGCCGAGAATCTTCAGCGCGTGCTTCGTATGCTCGCTAGCTATGGTGTTTTTGAGGAAGATATTAGTGGTGGTGAAAGGAAATACTCGCTAACTGACGTTGGGAAAACGCTTGTGACTGATGAACAAGGGTTGTCGTATGGTGCTTATGTGCTCCAGCACCACCAGGATGCATTAATGAGAGCATGGCCATTGGTCCATGAAGCAGTTTTGGACCCTTCAAAGGAGCCATTTGAGAGAGCTAATGGAGAAGGAGCATATGACTATTACTTGAAAAAACCAGAGATGAATGAGTTAATGTTGAAGGCTATGTCAGGGGTATCAGTGCCCTTCATGAAAGCCCTTTTGGAGAGCTATGCTGGCTTTCAAAATGTGGAGAAGTTAGTTGATGTTGGTGGCAGTGGTGGTGATTGTCTTAAAATGATCTTGCAGAAATACCCAAATATTAAACAAGGGTTAAACTTTGATCTTCCTGAAGTTGTGGCTAAAGCACCACAAATTCCAGGTGTAACTCATGTGGGTGGTGACATGTTCAAATACATTCCCCAAGCTGATGCTATCTTTATGAAGTGGGTGCTAGTAACATGGACAGACAAAGAAATCAAGCACATAATGCAAAATTGTTACAAGGCACTCCCAGCAGGTGGAAAACTAATTGCTTGTGAGCCAGTGTTACCAGAGAATTCAGATGATAGTCACAGAACAAGGGCATTGCTTGAAGGTGACATATTTGTGATGACAATTTACAGAGCCAAAGGAAAACATAGGACTGAAGAACAGTTTAAGCAGCTTGGAATTTCTGCAGGTTTCAATCTTTTCAAATCCTTTCATGTGGACCATTTCTATACTGTTCTTGAGTTTCAGAAATGA 1065 0.43 MEEETTESRKQARLAILELANMISVPMSLNAVVRLNVADAIWEGGSNAPLTAAQILARVIPDRSGDAENLQRVLRMLASYGVFEEDISGGERKYSLTDVGKTLVTDEQGLSYGAYVLQHHQDALMRAWPLVHEAVLDPSKEPFERANGEGAYDYYLKKPEMNELMLKAMSGVSVPFMKALLESYAGFQNVEKLVDVGGSGGDCLKMILQKYPNIKQGLNFDLPEVVAKAPQIPGVTHVGGDMFKYIPQADAIFMKWVLVTWTDKEIKHIMQNCYKALPAGGKLIACEPVLPENSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQLGISAGFNLFKSFHVDHFYTVLEFQK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02419 354 FunFam Caffeic acid 3-O-methyltransferase 109 354 - -
Trre12g02419 354 SUPERFAMILY "Winged helix" DNA-binding domain 8 106 IPR036390 -
Trre12g02419 354 Gene3D - 1 107 IPR036388 -
Trre12g02419 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
Trre12g02419 354 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Trre12g02419 354 Pfam O-methyltransferase domain 131 336 IPR001077 GO:0008171
Trre12g02419 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Trre12g02419 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
Trre12g02419 354 PANTHER O-METHYLTRANSFERASE 19 341 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02419 Trre-Chr12 27903277 27908051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02419 1 354 Monolignol Biosynthesis Gene Families AT3G53140 72.702 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02419 - - gmx:100784957 605.905