Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02396 ATGAAGAAGCTTCATGAAATCTGCACCTTTGTGGACAAATATGTGATGGATCAAAGCGACTTCTTGAGGCAAAGCATACGCAAAGCAGAAGAGAAGTTGAAGAAACTAAAGGAGGAAAATAGGAAGAACGAAATGACCAATATCTATTATCATTTTCTTCTGACTAATGAATTTAATGGCAATTTATGGACTAAATATGATCGTGATGATTTTTCGTCTTTTATTGATGGTAATTTGAAGGAAATTGTTCGAAAGATGGAACGAATGCAAATCGAAGCCCAAGAACAAGTCGGAAATATAGGTGAAGCTATGGATGGAACAATGGTGCATGAAAATATTGGTCATGTGCAAGGTCTATTGAATGGTGCAAATTTGGAGGCTAATATGGGTAATATTGCGGCTGATGTCCAAGGTTTGGAGGGTAATATGGATACTGCTGCTGCTGTCCAAGGTTTGGAGGCAAACATGAATTATGGTATGGAAAGTGATTTCCAAGATCTACTTATGGACTTACCACCATTTGATGATATTAATTTGGACACAACTATCTTTGGTCAAACTGGTCCAAATTTCCCTTAG 579 0.3731 MKKLHEICTFVDKYVMDQSDFLRQSIRKAEEKLKKLKEENRKNEMTNIYYHFLLTNEFNGNLWTKYDRDDFSSFIDGNLKEIVRKMERMQIEAQEQVGNIGEAMDGTMVHENIGHVQGLLNGANLEANMGNIAADVQGLEGNMDTAAAVQGLEANMNYGMESDFQDLLMDLPPFDDINLDTTIFGQTGPNFP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02396 192 Coils Coil 191 192 - -
Trre12g02396 192 Coils Coil 19 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02396 Trre-Chr12 27649642 27650339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02396 13 87 MADS-box Gene Family AT5G26630 36.000 1.47e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02396 - K01552 cam:101496969 100.523