Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02377 ATGGTGGGGTTCCAGAACGAGCATATGCCTGGGAACATTTATAGTAGTAGTCCAGGTCGTGTTGAACGACTTGTGAGAGAAAAATATAATAACTCTGGTGCTTCCCATGATGAACGATTCCTGGAAGGTGCTGTAGCAGCAGTAAGGGCTCTTAGTAATGGATATGAAAGGGAAGATGCAAAACCTGTTAGACAACGGCTTTTGGTTGTGGCTAATAGACTGCCAGTGTCTGCTGTTAGGAAAGGTGAGGATACTTGGTCTCTGGAGATCAGTGCTGGTGGCTTGGTGAGCGCGCTTTTAGGTGTGAAGGAGTTTGAAGCGAGGTGGATAGGTTGGGCTGGAGTCAATGTTATGGATGCGGTTGGACAGAAGTCACTCTCCGATGCGTTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTACTGAAGACATTGTTAATCAGTACTATAATGGCTATTGCAATAACATATTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTAACGACAACTCGTGGATTCCAGTCTCAATTTGATTCGTATCAGCAGGCAAATCAAATGTTTGCTGATGTTGTAAATAAAGTCTATGAAGAGGGAGATATTGTTTGGTGCCATGATTACCATCTTATGTTTCTACCACAATGCTTGAAGAAATTCAACAGCAAAATGAAAGTTGGTTGGTTTCTCCATACCCCGTTTCCATCTTCTGAAATTCACAGGACACTACCATCTCGTTCAGAGCTCCTGCGTGCAGTTCTTGCTGCAGATTTGGTCGGTTTTCACACCTATGATTATGCACGACACTTTGTTAGTGCTTGTACTCGCATTCTTGGACTTGAGGCCACACCAGAAGGGGTTGAGGATCAAGGGAAACTGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCAGACCGCTTCATTCGTGCGCTTGACCATCCTCAAGTCCAAGGTCCCATCAAAGACTTACAAGAAAGATTTAAAGGCAGAAAGGTTATGCTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTAGCTTTTGAGAAATTTTTGGAAGAAAATGAAGATTGGCGAGAAAAAGTTGTTCTGCTTCAAATTGCCGTGCCAACAAGAACAGATGTTCCGGAGTATCAAAAGCTTACGAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTGACTGCTGTTCCTATACATCACCTGGACCGCACTCTTGAGTTTCATGCACTGTGTGCTTTGTATGCTGTTACAGATGTAGCAATTGTCACCTCATTGAGGGATGGAATGAATCTTGTCAGCTACGAGTTTGTGGCCTGCCAAGAAAAAAGGAAGGGGGTTCTCATTCTTAGTGAATTTGCCGGTGCTGCGCAGTCTCTTGGTGCTGGGGCACTTCTGGTCAATCCCTGGAACATCTCAAAAGTTGCTGAAGCAATTGCCAAAGCTCTGAACATGCCATCTGCTGAGAGAGAGAAACGACATAGGCACAACTTCCATCATGTAACAACCCACACTGCACAGGAATGGGCAGAAACTTTTGTTAGCGAGCTAAATGATACTGTTGTTGAGGCTCAGCTAAGGACAAAACAAGTTCCACCACGGCTCCCAACTCCAAAAGCAATTCAACAATATATGAAGGCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAGCCAGTTGAGAGAAAAGGTGATCAATTGAAAGAAATGGAACTCTCAGTGCATCCAGAACTGAAACAACCCTTGACACAACTTTGCAGTGATCCAAATACTACAGTTGTCGTGCTTAGTGGAAGTGGTAGAACACTTCTAGATGAAAACTTTAGAGAATATAACACTTGGCTGGCAGCGGAGAATGGAATGTTTTTAAACTCTTCAAATGGAGAATGGATGACAACAATGCCAGAACAACTAAATATGGAATGGGTTGACAGCGTAAAGCATATTTTTGAGTATTTCACCGAAAGAACACCTCGGTCACATTTTGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAACATCTCTGCTCAGGTCCAATTTCAAGTGCATCAGTTGAAGTAGTTCAAGGGAGCCGATCAGTTGAGGTGCGAGCTGCTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCCTGGGGGAGATAGTTCACAGTAAATCCATGACAACACCAATTGATTATGTTCTGTGTATAGGACATTTTCTGGGAAAGGATGAAGACATATACGACTTTTTTGAGCCAGAGCCTTCTTGTTATGGTGCGAGTCTTCAACGAAGCAAGTTAACAGATGCAGCTAAGTTTCCTAATGAGAAGGCATCACCTATGAAGATCCCAGCAATTAAAAATGGATTCAAGTCAACAAATCAAAACAAGGGACAACGACCTATCTCAAATTCAGAGAAGAAAACAAATAATTCCAGTCGCACAGCACGGAAGCCAGCTCCCGAAAAGATCTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCATGTGCTGTTGGGAGAACTCAAACAAATGCTCGCTTTACGCTTCCATCATCTGATGAGGTTGCTGAATTTCTGAAGAAACTTGCACATACATCATCTAGTAATTAA 2700 0.4293 MVGFQNEHMPGNIYSSSPGRVERLVREKYNNSGASHDERFLEGAVAAVRALSNGYEREDAKPVRQRLLVVANRLPVSAVRKGEDTWSLEISAGGLVSALLGVKEFEARWIGWAGVNVMDAVGQKSLSDALAEKRCIPVFLTEDIVNQYYNGYCNNILWPLFHYLGLPQEDRLTTTRGFQSQFDSYQQANQMFADVVNKVYEEGDIVWCHDYHLMFLPQCLKKFNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEATPEGVEDQGKLTRVAAFPIGIDSDRFIRALDHPQVQGPIKDLQERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENEDWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRTLEFHALCALYAVTDVAIVTSLRDGMNLVSYEFVACQEKRKGVLILSEFAGAAQSLGAGALLVNPWNISKVAEAIAKALNMPSAEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPTPKAIQQYMKATNRLLILGFNGTLTEPVERKGDQLKEMELSVHPELKQPLTQLCSDPNTTVVVLSGSGRTLLDENFREYNTWLAAENGMFLNSSNGEWMTTMPEQLNMEWVDSVKHIFEYFTERTPRSHFEEREASLVWNYRHADVEFGKLQARDMLQHLCSGPISSASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYDFFEPEPSCYGASLQRSKLTDAAKFPNEKASPMKIPAIKNGFKSTNQNKGQRPISNSEKKTNNSSRTARKPAPEKISWNVLDLKKENYFSCAVGRTQTNARFTLPSSDEVAEFLKKLAHTSSSN 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02377 899 Gene3D Glycogen Phosphorylase B; 313 515 - -
Trre12g02377 899 CDD HAD_TPP 564 781 - -
Trre12g02377 899 Gene3D - 566 747 IPR023214 -
Trre12g02377 899 MobiDBLite consensus disorder prediction 815 845 - -
Trre12g02377 899 Gene3D Glycogen Phosphorylase B; 58 312 - -
Trre12g02377 899 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 653 733 - -
Trre12g02377 899 Pfam Trehalose-phosphatase 569 782 IPR003337 GO:0003824|GO:0005992
Trre12g02377 899 Gene3D - 653 733 - -
Trre12g02377 899 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 313 515 - -
Trre12g02377 899 NCBIfam trehalose-phosphatase 562 831 IPR003337 GO:0003824|GO:0005992
Trre12g02377 899 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 58 312 - -
Trre12g02377 899 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 66 531 IPR012766 GO:0003825|GO:0005992
Trre12g02377 899 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 65 534 - -
Trre12g02377 899 MobiDBLite consensus disorder prediction 810 847 - -
Trre12g02377 899 SUPERFAMILY HAD-like 563 894 IPR036412 -
Trre12g02377 899 CDD GT20_TPS 66 531 IPR001830 GO:0003824|GO:0005992
Trre12g02377 899 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 59 893 IPR001830 GO:0003824|GO:0005992
Trre12g02377 899 Pfam Glycosyltransferase family 20 66 531 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02377 Trre-Chr12 27443318 27451305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02377 9 898 Trehalose Biosynthesis Gene Families AT1G78580 72.611 0.0 1385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02377 K16055 - gmx:100789554 1447.95