Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02376 ATGGTGGGGTTCCAGAACGAGCATATGCCTGGGAACATTTATAGTAGTAGTCCAGGTCGTGTTGAACGACTTGTGAGAGAAAAATATAATAACTCTGGTGCTTCCCATGATGAACGATTCCTGGAAGGTGCTGTAGCAGCAGTAAGGGCTCTTAGTAATGGATATGAAAGGGAAGATGCAAAACCTGTTAGACAACGGCTTTTGGTTGTGGCTAATAGACTGCCAGTGTCTGCTGTTAGGAAAGGTGAGGATACTTGGTCTCTGGAGATCAGTGCTGGTGGCTTGGTGAGCGCGCTTTTAGGTGTGAAGGAGTTTGAAGCGAGGTGGATAGGTTGGGCTGGAGTCAATGTTATGGATGCGGTTGGACAGAAGTCACTCTCCGATGCGTTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTACTGAAGACATTGTTAATCAGTACTATAATGGCTATTGCAATAACATATTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTAACGACAACTCGTGGATTCCAGTCTCAATTTGATTCGTATCAGCAGGCAAATCAAATGTTTGCTGATGTTGTAAATAAAGTCTATGAAGAGGGAGATATTGTTTGGTGCCATGATTACCATCTTATGTTTCTACCACAATGCTTGAAGAAATTCAACAGCAAAATGAAAGTTGGTTGGTTTCTCCATACCCCGTTTCCATCTTCTGAAATTCACAGGACACTACCATCTCGTTCAGAGCTCCTGCGTGCAGTTCTTGCTGCAGATTTGGTCGGTTTTCACACCTATGATTATGCACGACACTTTGTTAGTGCTTGTACTCGCATTCTTGGACTTGAGGCCACACCAGAAGGGGTTGAGGATCAAGGGAAACTGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCAGACCGCTTCATTCGTGCGCTTGACCATCCTCAAGTCCAAGGTCCCATCAAAGACTTACAAGAAAGATTTAAAGGCAGAAAGGTTATGCTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTAGCTTTTGAGAAATTTTTGGAAGAAAATGAAGATTGGCGAGAAAAAGTTGTTCTGCTTCAAATTGCCGTGCCAACAAGAACAGATGTTCCGGAGTATCAAAAGCTTACGAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTGACTGCTGTTCCTATACATCACCTGGACCGCACTCTTGAGTTTCATGCACTGTGTGCTTTGTATGCTGTTACAGATGTAGCAATTGTCACCTCATTGAGGGATGGAATGAATCTTGTCAGCTACGAGTTTGTGGCCTGCCAAGAAAAAAGGAAGGGGGTTCTCATTCTTAGTGAATTTGCCGGTGCTGCGCAGTCTCTTGGTGCTGGGGCACTTCTGGTCAATCCCTGGAACATCTCAAAAGTTGCTGAAGCAATTGCCAAAGCTCTGAACATGCCATCTGCTGAGAGAGAGAAACGACATAGGCACAACTTCCATCATGTAACAACCCACACTGCACAGGAATGGGCAGAAACTTTTGTTAGCGAGCTAAATGATACTGTTGTTGAGGCTCAGCTAAGGACAAAACAAGTTCCACCACGGCTCCCAACTCCAAAAGCAATTCAACAATATATGAAGGCAACTAATCGATTGCTTATTTTGGGATTCAATGGAACTTTAACTGAGCCAGTTGAGAGAAAAGGTGATCAATTGAAAGAAATGGAACTCTCAGTGCATCCAGAACTGAAACAACCCTTGACACAACTTTGCAGTGATCCAAATACTACAGTTGTCGTGCTTAGTGGAAGTGGTAGAACACTTCTAGATGAAAACTTTAGAGAATATAACACTTGGCTGGCAGCGGAGAATGGAATGTTTTTAAACTCTTCAAATGGAGAATGGATGACAACAATGCCAGAACAACTAAATATGGAATGGGTTGACAGCGTAAAGCATATTTTTGAGTATTTCACCGAAAGAACACCTCGGTCACATTTTGAAGAAAGGGAAGCTTCACTTGTATGGAATTACAGACATGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTGCAACATCTCTGCTCAGGTCCAATTTCAAGTGCATCAGTTGAAGTAGTTCAAGGGAGCCGATCAGTTGAGGTGCGAGCTGCTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCCTGGGGGAGATAGTTCACAGTAAATCCATGACAACACCAATTGATTATGTTCTGTGTATAGGACATTTTCTGGGAAAGCAGGATGAAGACATATACGACTTTTTTGAGCCAGAGCCTTCTTGTTATGGTGCGAGTCTTCAACGAAGCAAGTTAACAGATGCAGCTAAGTTTCCTAATGAGAAGGCATCACCTATGAAGATCCCAGCAATTAAAAATGGATTCAAGTCAACAAATCAAAACAAGGGACAACGACCTATCTCAAATTCAGAGAAGAAAACAAATAATTCCAGTCGCACAGCACGGAAGCCAGCTCCCGAAAAGATCTCTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCATGTGCTGTTGGGAGAACTCAAACAAATGCTCGCTTTACGCTTCCATCATCTGATGAGGTTGCTGAATTTCTGAAGAAACTTGCACATACATCATCTAGTAATTAA 2703 0.4295 MVGFQNEHMPGNIYSSSPGRVERLVREKYNNSGASHDERFLEGAVAAVRALSNGYEREDAKPVRQRLLVVANRLPVSAVRKGEDTWSLEISAGGLVSALLGVKEFEARWIGWAGVNVMDAVGQKSLSDALAEKRCIPVFLTEDIVNQYYNGYCNNILWPLFHYLGLPQEDRLTTTRGFQSQFDSYQQANQMFADVVNKVYEEGDIVWCHDYHLMFLPQCLKKFNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEATPEGVEDQGKLTRVAAFPIGIDSDRFIRALDHPQVQGPIKDLQERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENEDWREKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRTLEFHALCALYAVTDVAIVTSLRDGMNLVSYEFVACQEKRKGVLILSEFAGAAQSLGAGALLVNPWNISKVAEAIAKALNMPSAEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPTPKAIQQYMKATNRLLILGFNGTLTEPVERKGDQLKEMELSVHPELKQPLTQLCSDPNTTVVVLSGSGRTLLDENFREYNTWLAAENGMFLNSSNGEWMTTMPEQLNMEWVDSVKHIFEYFTERTPRSHFEEREASLVWNYRHADVEFGKLQARDMLQHLCSGPISSASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKQDEDIYDFFEPEPSCYGASLQRSKLTDAAKFPNEKASPMKIPAIKNGFKSTNQNKGQRPISNSEKKTNNSSRTARKPAPEKISWNVLDLKKENYFSCAVGRTQTNARFTLPSSDEVAEFLKKLAHTSSSN 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02376 900 Gene3D Glycogen Phosphorylase B; 313 515 - -
Trre12g02376 900 Pfam Trehalose-phosphatase 569 783 IPR003337 GO:0003824|GO:0005992
Trre12g02376 900 Pfam Glycosyltransferase family 20 66 531 IPR001830 GO:0003824|GO:0005992
Trre12g02376 900 Gene3D Glycogen Phosphorylase B; 58 312 - -
Trre12g02376 900 SUPERFAMILY HAD-like 563 895 IPR036412 -
Trre12g02376 900 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 653 733 - -
Trre12g02376 900 MobiDBLite consensus disorder prediction 816 846 - -
Trre12g02376 900 CDD HAD_TPP 564 782 - -
Trre12g02376 900 Gene3D - 653 733 - -
Trre12g02376 900 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 313 515 - -
Trre12g02376 900 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 58 312 - -
Trre12g02376 900 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 66 531 IPR012766 GO:0003825|GO:0005992
Trre12g02376 900 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 65 534 - -
Trre12g02376 900 Gene3D - 566 747 IPR023214 -
Trre12g02376 900 CDD GT20_TPS 66 531 IPR001830 GO:0003824|GO:0005992
Trre12g02376 900 NCBIfam trehalose-phosphatase 562 820 IPR003337 GO:0003824|GO:0005992
Trre12g02376 900 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 59 894 IPR001830 GO:0003824|GO:0005992
Trre12g02376 900 MobiDBLite consensus disorder prediction 811 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02376 Trre-Chr12 27443318 27451305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02376 9 899 Trehalose Biosynthesis Gene Families AT1G78580 72.534 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02376 K16055 - gmx:100789554 1443.33