Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02367 ATGCATCATTACTTGATCCAAATGAGTCAAGAAATGTATTTTGCAACCTCAATGCTCCTCCTCCTATTAACATACATAGCTATAAACTTTTTTTCATCACTCAATAGTAAAGCCAAAAAACAAAACTATAAGCTTCCACCAGGACCTTCACATTTTTCAATCATGTTAAATGCTTTTAAATTAGGAAAAAAACCACAATACTCATTAGCAAAATTATCCACCTTGCATGGTCCAATAATGCATTTAAAACTAGGTCAAATATCAACCATAGTAATTTCTTCTGCTGAAATAGCACAAGAAGTGCTTCAAACATATGATCACTTATTTTCAAATAGAACAATCACTCAAGCTGTTTCAGTTCTCAATCATGCTCATTTTAGCTTACCCTTTATGCCAGTTTGTGATTATTGGAGAGACTTAAGAAAAATATGCAAAAATAATTTGTTTTCTAACAAAACTCTTGATGCTAGCCATGCACTTAGGTGTAAAAAGCTAGAAGAGCTTTTGTTTGATATTGAAAAAAGTAGCTTAATTGGTGAAGCTGTTGATGTTGGAAGAGCTATTTTTATGACTTCATTAAATTTTTTATCAAACTCTTTTTTCTCTATGGATTTTGTTAACTCTTCAGGTGAAACTGATGAATATAAAGGTATTGTTGAAAATCTTGTGAGAGCAATAGGAACACCAAACATAGTTGATTTTTTTCCAGTTTTGAAAATGGTTGATCCGCAAGGTATAAGTGGAATTTCAGCTACTTATCTTGAAAAGTTGTTGGATATCATTGGTTCATATATTAGCAAAAGATTGGAATTGAGGAATGGAGAAAATTATGTCCCTAATGATGACATGTTAGACAATTTGCTCAACATCTCTCAAGAGAATGACCAAAAGATGGACAACACAAAGATTAAACATTTGTTTCTTGATTTATTTGTTGCGGGAACTGATACAACTTCCTACACAATTGAAAGAGCAATGGCTGAACTAATCTACAACCCACGAGTAATGTCAAAAGCAAAAGAAGAACTTGAGCAAATAATTGGTATAGGAAATACAGTTCAAGAATCAGATGTTCCTAAACTTCCATATTTACAAGCAATAGTAAAAGAAACATTACGTTTGCACCCATCAGCTCCACTTTTACTACCAAGAAAAGCTAAGGTAGATGTAATACTTCAAGGATACATTATTCCAAAAGGTGCACAAGTTCTAATTAACAAATGGGCTATGGGAAGGAACCCAAAAATTTGGGATAATCCAACTTTGTTTTCACCTGAAAGATTTTTGGGTTCTGAAATTAATTATAAGGGTCATAATTTTCAATTGACACCATTTGGTAGTGGAAGAAGAATATGTCCTGGCATGCCACTTGCTATTAAAATGTTGCATACTATGTTGGGATCATTGATTAATTTCTTTGATTGGAAACTTGAAAATGGTGATAGAGATATTGATCAACCTTTGAGAGCTATTCCGGTTAGAGTAAACAAGGCGTAA 1497 0.328 MHHYLIQMSQEMYFATSMLLLLLTYIAINFFSSLNSKAKKQNYKLPPGPSHFSIMLNAFKLGKKPQYSLAKLSTLHGPIMHLKLGQISTIVISSAEIAQEVLQTYDHLFSNRTITQAVSVLNHAHFSLPFMPVCDYWRDLRKICKNNLFSNKTLDASHALRCKKLEELLFDIEKSSLIGEAVDVGRAIFMTSLNFLSNSFFSMDFVNSSGETDEYKGIVENLVRAIGTPNIVDFFPVLKMVDPQGISGISATYLEKLLDIIGSYISKRLELRNGENYVPNDDMLDNLLNISQENDQKMDNTKIKHLFLDLFVAGTDTTSYTIERAMAELIYNPRVMSKAKEELEQIIGIGNTVQESDVPKLPYLQAIVKETLRLHPSAPLLLPRKAKVDVILQGYIIPKGAQVLINKWAMGRNPKIWDNPTLFSPERFLGSEINYKGHNFQLTPFGSGRRICPGMPLAIKMLHTMLGSLINFFDWKLENGDRDIDQPLRAIPVRVNKA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02367 498 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 FunFam Cytochrome P450 76C4 37 489 - -
Trre12g02367 498 Pfam Cytochrome P450 46 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 CDD CYP76-like 76 492 - -
Trre12g02367 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Trre12g02367 498 Gene3D Cytochrome P450 37 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 SUPERFAMILY Cytochrome P450 46 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02367 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 19 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02367 Trre-Chr12 27319899 27322219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02367 19 494 Cytochrome P450 AT2G45550 42.169 2.29e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02367 - - gmx:100792017 625.165