Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02366 ATGTTAAATGCTTTTAAATTAGGAAAAAAACCACAATACTCATTAGCAAAATTATCCACCTTGCATGGTCCAATAATGCATTTAAAACTAGGTCAAATATCAACCATAGTAATTTCTTCTGCTGAAATAGCACAAGAAGTGCTTCAAACATATGATCACTTATTTTCAAATAGAACAATCACTCAAGCTGTTTCAGTTCTCAATCATGCTCATTTTAGCTTACCCTTTATGCCAGTTTGTGATTATTGGAGAGACTTAAGAAAAATATGCAAAAATAATTTGTTTTCTAACAAAACTCTTGATGCTAGCCATGCACTTAGGTGTAAAAAGCTAGAAGAGCTTTTGTTTGATATTGAAAAAAGTAGCTTAATTGGTGAAGCTGTTGATGTTGGAAGAGCTATTTTTATGACTTCATTAAATTTTTTATCAAACTCTTTTTTCTCTATGGATTTTGTTAACTCTTCAGGTGAAACTGATGAATATAAAGGTATTGTTGAAAATCTTGTGAGAGCAATAGGAACACCAAACATAGTTGATTTTTTTCCAGTTTTGAAAATGGTTGATCCGCAAGGTATAAGTGGAATTTCAGCTACTTATCTTGAAAAGTTGTTGGATATCATTGGTTCATATATTAGCAAAAGATTGGAATTGAGGAATGGAGAAAATTATGTCCCTAATGATGACATGTTAGACAATTTGCTCAACATCTCTCAAGAGAATGACCAAAAGATGGACAACACAAAGATTAAACATTTGTTTCTTGATTTATTTGTTGCGGGAACTGATACAACTTCCTACACAATTGAAAGAGCAATGGCTGAACTAATCTACAACCCACGAGGTCATAATTTTCAATTGACACCATTTGGTAGTGGAAGAAGAATATGTCCTGGCATGCCACTTGCTATTAAAATGTTGCATACTATGTTGGGATCATTGATTAATTTCTTTGATTGGAAACTTGAAAATGGTGATAGAGATATTGATCAACCTTTGAGAGCTATTCCGGTTAGAGTAAACAAGGCGTAA 1029 0.3265 MLNAFKLGKKPQYSLAKLSTLHGPIMHLKLGQISTIVISSAEIAQEVLQTYDHLFSNRTITQAVSVLNHAHFSLPFMPVCDYWRDLRKICKNNLFSNKTLDASHALRCKKLEELLFDIEKSSLIGEAVDVGRAIFMTSLNFLSNSFFSMDFVNSSGETDEYKGIVENLVRAIGTPNIVDFFPVLKMVDPQGISGISATYLEKLLDIIGSYISKRLELRNGENYVPNDDMLDNLLNISQENDQKMDNTKIKHLFLDLFVAGTDTTSYTIERAMAELIYNPRGHNFQLTPFGSGRRICPGMPLAIKMLHTMLGSLINFFDWKLENGDRDIDQPLRAIPVRVNKA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02366 342 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 280 325 - -
Trre12g02366 342 PRINTS E-class P450 group I signature 19 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 PRINTS E-class P450 group I signature 296 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 PRINTS E-class P450 group I signature 43 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 PRINTS E-class P450 group I signature 286 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 Gene3D Cytochrome P450 279 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 Pfam Cytochrome P450 2 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 Pfam Cytochrome P450 281 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 289 298 IPR017972 GO:0005506|GO:0016705
Trre12g02366 342 SUPERFAMILY Cytochrome P450 4 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02366 342 Gene3D Cytochrome P450 1 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02366 Trre-Chr12 27249033 27251192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02366 3 280 Cytochrome P450 AT3G61040 40.000 2.50e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02366 - - gmx:100792017 344.354