Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02365 ATGCATCATTACTTGATCCAAATGAGTCAAGAAATGTATTTTGCAACCTCAATGCTCCTCCTCCTATTAACATACATAGCTATAAACTTTTTTTCATCACTCAATAGTAAAGCCAAAAAACAAAACTATAAGCTTCCACCAGGACCTTCACATTTTTCAATCATGTTAAATGCTTTTAAATTAGGAAAAAAACCACAATACTCATTAGCAAAATTATCCACCTTGCATGGTCCAATAATGCATTTAAAACTAGGTCAAATATCAACCATAGTAATTTCTTCTGCTGAAATAGCACAAGAAGTGCTTCAAACATATGATCACTTATTTTCAAATAGAACAATCACTCAAGCTGTTTCAGTTCTCAATCATGCTCATTTTAGCTTACCCTTTATGCCAGTTTGTGATTATTGGAGAGACTTAAGAAAAATATGCAAAAATAATTTGTTTTCTAACAAAACTCTTGATGCTAGCCATGCACTTAGGTGTAAAAAGCTAGAAGAGCTTTTGTTTGATATTGAAAAAAGTAGCTTAATTGGTGAAGCTGTTGATGTTGGAAGAGCTATTTTTATGACTTCATTAAATTTTTTATCAAACTCTTTTTTCTCTATGGATTTTGTTAACTCTTCAGGTGAAACTGATGAATATAAAGGTATTGTTGAAAATCTTGTGAGAGCAATAGGAACACCAAACATAGTTGATTTTTTTCCAGTTTTGAAAATGGTTGATCCGCAAGGTATAAGTGGAATTTCAGCTACTTATCTTGAAAAGTTGTTGGATATCATTGGTTCATATATTAGCAAAAGATTGGAATTGAGGAATGGAGAAAATTATGTCCCTAATGATGACATGTTAGACAATTTGCTCAACATCTCTCAAGAGAATGACCAAAAGATGGACAACACAAAGATTAAACATTTGTTTCTTGATTTATTTGTTGCGGGAACTGATACAACTTCCTACACAATTGAAAGAGCAATGGCTGAACTAATCTACAACCCACGAGGTCATAATTTTCAATTGACACCATTTGGTAGTGGAAGAAGAATATGTCCTGGCATGCCACTTGCTATTAAAATGTTGCATACTATGTTGGGATCATTGATTAATTTCTTTGATTGGAAACTTGAAAATGGTGATAGAGATATTGATCAACCTTTGAGAGCTATTCCGGTTAGAGTAAACAAGGCGTAA 1191 0.3275 MHHYLIQMSQEMYFATSMLLLLLTYIAINFFSSLNSKAKKQNYKLPPGPSHFSIMLNAFKLGKKPQYSLAKLSTLHGPIMHLKLGQISTIVISSAEIAQEVLQTYDHLFSNRTITQAVSVLNHAHFSLPFMPVCDYWRDLRKICKNNLFSNKTLDASHALRCKKLEELLFDIEKSSLIGEAVDVGRAIFMTSLNFLSNSFFSMDFVNSSGETDEYKGIVENLVRAIGTPNIVDFFPVLKMVDPQGISGISATYLEKLLDIIGSYISKRLELRNGENYVPNDDMLDNLLNISQENDQKMDNTKIKHLFLDLFVAGTDTTSYTIERAMAELIYNPRGHNFQLTPFGSGRRICPGMPLAIKMLHTMLGSLINFFDWKLENGDRDIDQPLRAIPVRVNKA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02365 396 SUPERFAMILY Cytochrome P450 42 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 334 379 - -
Trre12g02365 396 PRINTS E-class P450 group I signature 340 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 PRINTS E-class P450 group I signature 350 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 Gene3D Cytochrome P450 334 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 343 352 IPR017972 GO:0005506|GO:0016705
Trre12g02365 396 Gene3D Cytochrome P450 37 333 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 Pfam Cytochrome P450 46 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g02365 396 Pfam Cytochrome P450 335 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02365 Trre-Chr12 27249033 27251354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02365 44 334 Cytochrome P450 AT3G61040 40.614 1.21e-71 228