Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02317 ATGACATCAGGGGCGAGACTTCCCACATGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGAAGAAGAGCTATAGCTGCTAAGATATTCTCTGGTTTGAGAATGTATGGTAATTTCAGATTACCAAAACATTGTGATAACAATGAAGTTCTTAAAGCTCTTTGTAATGATGCTGGTTGGACTGTTGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCTTTAGAGCAAATGGATATAGGTTGTGGATCATCAGCTGTAAGCCCTTGCTCATCTTACCATCCTAGCCCTGGTTCATCTTCCTTCCCAAGTCCATCTTCATCCCCTTACACCGCAAATCGTAATGCCGATGGTAATTCTCTCATTCCATGGCTAAAAAACCTCTCCACAACTTCATCTTCGGCATCATCTCCGAAACTTCCCTATCCCTATCTTCACAGCGGCTCCATCAGCGCTCCTGTCACACCTCCCTTGAGCTCTCCGACTGCTAGAACGCCGCAGATGAATGTTACTGATTGGGAAGAGCGGTCTGCACGGACAGGATGGACCGGACAACATTACTCGTTCTTGCCTTCTTCCGGTCCTACAAGCCCCGGCCGTCAAGCAGTTGATCCTGAATGGTTTGCTGGGGTCAAACTTCCTAATGCTAGGCCAACTTCTCCAACATTCAACCTTGTCTCGCGAAATCCATTTGCTTTCAAGGAAGATGGTTATTCGGGCAGCGGTTCACGCATGTGGACCCCTGGACAGAGTGGAACGTGTTCTCCGGCTATTGCAGCAGGCGCTGATCACACTGCTGATATTCCTATGTCAGAAGTCATCTCAGATGAATTTGCATTTGGAAGCAACACATTTGGGATTGTCAAGCCTTGGGAAGGAGAAAGAATCCATGAAGAATTTGTAGCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGGTGA 954 0.4706 MTSGARLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFRLPKHCDNNEVLKALCNDAGWTVEPDGTTYRKGCKPLEQMDIGCGSSAVSPCSSYHPSPGSSSFPSPSSSPYTANRNADGNSLIPWLKNLSTTSSSASSPKLPYPYLHSGSISAPVTPPLSSPTARTPQMNVTDWEERSARTGWTGQHYSFLPSSGPTSPGRQAVDPEWFAGVKLPNARPTSPTFNLVSRNPFAFKEDGYSGSGSRMWTPGQSGTCSPAIAAGADHTADIPMSEVISDEFAFGSNTFGIVKPWEGERIHEEFVADDLELTLGNSKTR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02317 317 MobiDBLite consensus disorder prediction 1 21 - -
Trre12g02317 317 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 317 IPR033264 GO:0003700|GO:0006351|GO:0009742
Trre12g02317 317 MobiDBLite consensus disorder prediction 95 116 - -
Trre12g02317 317 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 131 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02317 Trre-Chr12 26435950 26437865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02317 1 317 BZR Transcription Factor Family AT1G78700 65.970 7.61e-123 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Trre12g02317 BES1_N 1.8e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02317 - - gmx:100795369 483.026