Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02316 ATGACGTCGGGGACGAGACAACCTACATGGAAGGAGAGAGAAAACAACAAGAGGAGAGAGAGAAGAAGACGAGCTATAGCAGCGAAGATCTTCTCCGGTTTGAGAATGTATGGTAACTACAAGCTTCCGAAACACTGCGATAACAATGAAGTTCTCAAAGCTCTCTGTAATGAAGCCGGTTGGACCGTTGAACCGGATGGCACAACATATCGTAAGGGATGCAAGCCTGTTGAACGCATGGATGTGGTAGGTGGTTCTGCAATGGGAAGCCCGTGCTCATCTTACCATCCAAGCCCATGTGCTTCCTACAACCCAAGTCCTGGCTCTTCTTCCTTCCCTAGCCCGCGCTCATCCCATCCTGCAACTCCTAATGGCGATGCCAATTCCCTTATTCCTTGGCTCAAAAACCTCTCATCTGGATCATCATCAGCATCCTCTTCCAAGCATCCGCAGCTATTCATTCATACTGGCTCCATCAGTGCTCCCGTCACTCCTCCACTTAGCTCTCCAACTGCCCGATCATCACAGGCTAAAGCTGACATCTGGGAAGATCAGTCCATTCGTCCTGGTTGGGGCGGGCAGCAGAACCCTTTCCTGCCCTCATCCACTCCTCCAAGCCCTGGTCGCCAAGTTCTTGACCCAGATTGGTTTGCTGGGATTAGAATGCCCCAGGGTGGGCCAACTTCGCCTACCTTTAGCCTCGTCGCCACTAATCCATTTGGCTTCAGGGAAGAGGTTTTCTGTGGCAGTGATTCTCGCATGTGGACACCTGGACAAAGTGGGACATGTTCTCCAGCTATAGCTGCAGGCTCTGATCATACAGCTGACATACCAATGGCTGAATCTGTTTCAGACGAATTTGCCTTTGGTTTGGTGAAGCCTTGGGAAGGAGAGAGGATCCATGAAGATAGCGGATCAGATGATTTGGAGCTCACTCTTGGTAGCTCAAAGACCAGGTAA 960 0.5073 MTSGTRQPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDVVGGSAMGSPCSSYHPSPCASYNPSPGSSSFPSPRSSHPATPNGDANSLIPWLKNLSSGSSSASSSKHPQLFIHTGSISAPVTPPLSSPTARSSQAKADIWEDQSIRPGWGGQQNPFLPSSTPPSPGRQVLDPDWFAGIRMPQGGPTSPTFSLVATNPFGFREEVFCGSDSRMWTPGQSGTCSPAIAAGSDHTADIPMAESVSDEFAFGLVKPWEGERIHEDSGSDDLELTLGSSKTR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02316 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 319 IPR033264 GO:0003700|GO:0006351|GO:0009742
Trre12g02316 319 MobiDBLite consensus disorder prediction 299 319 - -
Trre12g02316 319 MobiDBLite consensus disorder prediction 96 127 - -
Trre12g02316 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 138 IPR008540 -
Trre12g02316 319 MobiDBLite consensus disorder prediction 1 22 - -
Trre12g02316 319 MobiDBLite consensus disorder prediction 187 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02316 Trre-Chr12 26426995 26430468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02316 1 319 BZR Transcription Factor Family AT1G78700 68.657 1.69e-127 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Trre12g02316 BES1_N 2.2e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02316 - - pvy:116115184 512.686