Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02209 ATGTCTTCTTCTACCAACATCCGTGAGAACTTTGTCTATGTTGCCAAGCTAGCAGAACAAGCTGAACGCTATGATGAAATGGTGGAAGCAATGAAGAAACTGGCGAAGATGGATGTTGAATTGAGTGTGGAAGAGAGAAACTTGTTCTCTGTTGGGTACAAGAATGTGGTAGGGTCAAGGAGAGCTTCATGGAGGATCCTATCATCAATAGAGCAGAAAGAAGAATCAAAAGGGAACGAATTGAACGTTAAGCGTATTAAGGATTACCGGCAGAAGGTGGAGTTGGAGTTGTCCAACATTTGCAATGACATTATGATTCTCTTAGATGAGCATCTTATTCCATCGACTAATATCGCTGAATCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACCGGTATTTAGCTGAATTTAAAGATGGTAATGAAAAGAAAGAGGTAGCTGATCAGTCACTTCAAGCATATCAGACAGCTTCTGCCACTGCTGAGAATGAATTACAACCTACGCATCCTATCCGATTGGGTCTGGCTCTAAATTTCTCGGTGTTTTATTATGAGATATTGAATTCACCTGAAAGGGCATGTCACCTTGCAAAGCAAGCTTTTGATGATGGTGTCTCAGAGCTGGATACCCTAAATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGAGAGACAACCTTAATTTATGGACTTCTGATATCCCAGAAGATAGCGAGGAACAAAAAATTGAAAGCGCAGCTAGGACCGGTCAAGATGAAGATGAATTGGGCCGTTAA 792 0.4066 MSSSTNIRENFVYVAKLAEQAERYDEMVEAMKKLAKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIKDYRQKVELELSNICNDIMILLDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKDGNEKKEVADQSLQAYQTASATAENELQPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDGVSELDTLNEDSYKDSTLIMQLLRDNLNLWTSDIPEDSEEQKIESAARTGQDEDELGR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02209 263 SMART 1433_4 8 249 IPR023410 -
Trre12g02209 263 Coils Coil 14 37 - -
Trre12g02209 263 FunFam 14-3-3 protein epsilon 4 249 - -
Trre12g02209 263 MobiDBLite consensus disorder prediction 240 263 - -
Trre12g02209 263 Pfam 14-3-3 protein 15 236 IPR023410 -
Trre12g02209 263 PIRSF 14-3-3 2 249 IPR000308 -
Trre12g02209 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Trre12g02209 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Trre12g02209 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Trre12g02209 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Trre12g02209 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Trre12g02209 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Trre12g02209 263 Gene3D - 1 251 IPR036815 -
Trre12g02209 263 PANTHER 14-3-3 PROTEIN 8 239 IPR000308 -
Trre12g02209 263 SUPERFAMILY 14-3-3 protein 8 238 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02209 Trre-Chr12 24264226 24267858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02209 8 260 14-3-3 family AT2G42590 73.333 7.21e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02209 K06630 - gmx:100806167 464.536