Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02174 ATGGATATTCGACGCGCCTCACACCCCGTTATCGATCCCAAACTAAGGCGCGTTGGTTTCTTCGACCAACCCCAACCCGAACCCGAACCACCGCACCTTCCGGATTCTCCACCACACGACCCGGTCTCCCCAGTCATCTTGCCGCCTCCACGACTTCTTTCCGAACGAACCGCCGCCGTTCCTGTTCCCGAGTCCAGATTCCGACGCAACGAACTCGACGATCAGGTGCCGATTGGAAGCTACAATCCCACTCGGTGTGTGCTCAAAACCTCGCCGACGGCTTCGATTACTTCTAGCAGTGCCGGAATCATTGACGGTGAGTTCTCTGAGGATTGCTCTGGTGCCGGATGGTTTCGTGGCAGCGAATTAAGTTTTCCTGACGGTGGGTTGGATATACCGGCTGTGAAGCCTTGTGAAGTTTTGGCGGAGAATAGGTCTAATGTGGCGGTGAATGTGAATAATCTTCGTAGAGACACTGAAAAGAAGCACGAGGCTGTCAAAGAAGTATGTCCTGATACGCCGTCAGTTTCACAGCCATTGAAAGCAAAAACTACAAAGGCTGAGAGACGAGCCCTGCAGGAGGCACAAAGAGCTGCAAAAGCTTCTAAAGCTAATGGAAGTTCAGCAGTTGCTGAATCTGGCAAAGCATCCCCAGCGAAAAGTAAAAAGCAGTCTTCACAAAAGAAAGATGGTCCTCCAGTTACATCATCGGTCACTATTGATAAGAAATCTATTAATCATCCTTTGGAGAAAGAGAGAAAAAAAGATCCTCCTCCTCAACGAATGCAATTTGATGATCTAAACAGAGTGGAAAAAGCTAAAAGGCGTGCACTAGTGAATCAAACTGAAGCAAGAAACAGAGTTGAATTATTTCGGCATTTGCCTCAATATGAACATGGGAATCAGCTTCCTAATCTTGAGTCAAGGCTTTTCCAACTTGACTCGATGCATCCTGCTGTGTTCAAGGTTGGATTACGTTATATGGCCGGAGATATATCAGGAGTTAATGCTCGTTGTACCGAAATGCTTAGAGCGCTTCAGGATGCCATTATAGACTACTCCACTCCGCCTGAAAAAGTACTTATTAGGGATTTAACTGCAAAAATTAATAGTTATGTTTCATTTATTAGCGAATGCCGACCGCTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTGAAGAGTCACATTGCCAAGTTGCCCTTAAGTTATACAGATGCTGAGGCAAAAGCATCTCTTTGTTCTGATATTGACAGATTCATTAATGAAAAAATTATTATTGCGGATAAGGTGATTGTTGGACATGCTACTACCAAAATTAGGGATGGAGATGTTCTTCTTACATATGGATTGTCTTGTGTTGTTGAGATGATTCTCTTGTCTGCTCATGAACTTGGGAAAAAATTCCGAGTTGTGGTGGTAGACTCACGACCAAAGTTTGAAAGTCAGGCCTTACTTGCTAGGCTTATGGCCAAGGGCCTGAGTTGTACGTATACTCATATAAATGCTATTTCTTATATCATGCACGAGGTTACAAAAGTTTTTCTGGGAGCTTCTGCTGTCCTGTCTAATGGAACTGTACTTTCAAGGATTGGGACAGCATGTATTGCAATGGTGGCTCATGAATTTCGTGTTCCGGTATTAATCTGTTGTGAAGCTTTTAAGTTTCATGAAAGGGTGCTACTTGATTCGATATGTTGCAATGAAATAGGCGACCCAGGTGCTGTTGCTACAGTTCCTGGAAGAATGGATATCAATTATCTGGACAATTGGACAAACAAAGAAAATTTGCAGCTTTTGAATTTGATGTATGATGTTACTCCTTCGGATTACATCTCAGTTATTGTTACAGATCATGGAATGATCCCTCCTACAAGTGTGCCTGTGATCGTACGCGAGTATGGACAAGAGCATTACATTACTTGA 1926 0.4372 MDIRRASHPVIDPKLRRVGFFDQPQPEPEPPHLPDSPPHDPVSPVILPPPRLLSERTAAVPVPESRFRRNELDDQVPIGSYNPTRCVLKTSPTASITSSSAGIIDGEFSEDCSGAGWFRGSELSFPDGGLDIPAVKPCEVLAENRSNVAVNVNNLRRDTEKKHEAVKEVCPDTPSVSQPLKAKTTKAERRALQEAQRAAKASKANGSSAVAESGKASPAKSKKQSSQKKDGPPVTSSVTIDKKSINHPLEKERKKDPPPQRMQFDDLNRVEKAKRRALVNQTEARNRVELFRHLPQYEHGNQLPNLESRLFQLDSMHPAVFKVGLRYMAGDISGVNARCTEMLRALQDAIIDYSTPPEKVLIRDLTAKINSYVSFISECRPLSISMGNAIRFVKSHIAKLPLSYTDAEAKASLCSDIDRFINEKIIIADKVIVGHATTKIRDGDVLLTYGLSCVVEMILLSAHELGKKFRVVVVDSRPKFESQALLARLMAKGLSCTYTHINAISYIMHEVTKVFLGASAVLSNGTVLSRIGTACIAMVAHEFRVPVLICCEAFKFHERVLLDSICCNEIGDPGAVATVPGRMDINYLDNWTNKENLQLLNLMYDVTPSDYISVIVTDHGMIPPTSVPVIVREYGQEHYIT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02174 641 MobiDBLite consensus disorder prediction 228 243 - -
Trre12g02174 641 MobiDBLite consensus disorder prediction 24 48 - -
Trre12g02174 641 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 151 638 - -
Trre12g02174 641 MobiDBLite consensus disorder prediction 200 221 - -
Trre12g02174 641 MobiDBLite consensus disorder prediction 155 169 - -
Trre12g02174 641 MobiDBLite consensus disorder prediction 1 50 - -
Trre12g02174 641 MobiDBLite consensus disorder prediction 244 267 - -
Trre12g02174 641 Gene3D - 427 634 IPR042529 -
Trre12g02174 641 Pfam Initiation factor 2 subunit family 332 624 IPR000649 GO:0044237
Trre12g02174 641 MobiDBLite consensus disorder prediction 155 267 - -
Trre12g02174 641 SUPERFAMILY NagB/RpiA/CoA transferase-like 329 634 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02174 Trre-Chr12 23466200 23471443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02174 1 640 Eukaryotic Initiation Factors Gene Family AT5G38640 57.014 0.0 673