Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02157 ATGCCTGTGACAGACTTCAATGATGTGCAAAATCTCGATGACGGCATTCTTTTCCCTGTTGAAGAGATTGCGCAATACCCATTGCCTGGATATGTATCACCGACTTCAATAAGTTTTAGTCCAGATGATAGTTTGATTTCTTATTTATTTAGTCCTGATAATACATTAAACAGAAAGATTTTCACTTTTGATCTGAAGACCAATAAACAAGAATTGTTATTCAGCCCCCCTGATGGCGGACTTGATGAGAGTAATATTTCTCCAGAAGAAAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGAGTGACGCGGTACGAATGGGTGAAGACGAACTCAAAAAGGAAAACAGTCATGGTGCCATTACCTGCTGGGATTTATTTCCATGATATTTCCCATTCAAAAGCAGAGCTCAAGCTTCCAAGTATACCAGCTTCACCCATTATTGATCCACATTTGTCTCCAGATGGATCTATGCTTGCTTATGTAAGAGACTATGAGTTGTATGTTATGAATCTCTTGTCTAATGAATCAAAGCAGTTGACCCATGGCGCGAAGGAAAATGTCGTTATTCACGGGCTTGCCGAATATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACTGTAAATATATTGCTTTTACAGAAGTTGATTATTCTGAAATACCCCTTTTTAGAATTATGCACCAAGGTAAGAGCTCAGTTGGCACAGATGCACAGGAAGATCATCCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTACGGCTTGGGGTTGTTCCGGTAGCTGGAGGCTCCACCACTTGGATGGATCTTGTCTGCGGGGGTGTGAAAGAATTAGACAATGAGGATGAATATTTGGCAAGAGTTAATTGGATGCATGGAAATGTTCTCGCTGCTCAGATCATAAATAGACACCAGACTAAAATAAAGCTTGTTAAGTTTGATATTAGAACAGGAGAAAAGAGAGTGATATTGGTAGAAGAAAACAAAACTTGGATCAACATACATGATTGTTTCACACCTCTTGATAAAGGAGTTACCAAGTTTTCAGGTGGATTTATCTGGGCTAGTGAGAAATCAGGATTTAGACATCTCTATCTTCATGATGCAAATGGGAATTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATCGCCGGTGTGAATGAGGCAACAGGTCTAATATATTTCACCGGAACCTTAGATAGTCCTCTTGAATCCAACTTATACTGTACTAAACTTTTTGTCGATGGAACTCAACCACTTCAAGCCCCTACCAGACTTACACATAGCAAGGGAAAGCACATTGTGGTCCTTGACCATCATATGCAAACATTTGTTGATTTACATGACTCCCTTAGTTGTCCGCCTAGGGTATTACTTTGCTCGTTAGAGGATGGAAGCATAATCATGCCTTTGTATGAACAGCCAATACCAATTTCAAAATCCAAAAAGCTTCAACTTGAGTCTCCAGAGATTGTTGAAGTACAGGCTGACGATGGTACCATCTTATATGGAGCTCTTTATAAGCCTGATGTTTCAAGATTTGGACCTCCACCTTACAAAACGATGATCAATGTTTATGGTGGTCCAAGTGTACAGCTTGTTTCTAACTCTTGGCAAAATACAGTTGACCTGAGAGCACAATACTTGAGAAATAAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTTCTAGACGAGGGTTGAAGTTTGAAAGCTATTTGAAGCACAAACTTGGACAAATTGACGCTGATGATCAATTTACTGGAGCAGAGTGGCTTGTCAAACAAGGGCTTGCAGAATTTGGTCACATCGGGTTATACGGGTGGAGCTATGGCGGGTATCTCTCTGCTATGACATTGTCAAGGTATCCAGATTTCTTCAAGTGTGCTATAGCCGGTGCACCCGCTACATCATGGGATGGATACGACACATTCTACACTGAGAAGTACATGGGATTGCCATCTGAAAATAAATCAGGGTATGTAAGAGCTTCTGTGATGAACCATGTGCATAAGTTGAAAGGACAGTTGTTACTTGTGCATGGCATGATTGACGAGAATGTACATTTTCGACACACTGCAAGGCTTATAAATGCACTTGTGGCAGCTGGAAAAACGTATGAGCTGATAATATTCCCGGATGAGCGTCACATGCCTCGGCGATATAGCGATCGAGTTTATATGGAAGAGAGGATGTGGGAATTCATAGACAGGAATCTGTAA 2265 0.4102 MPVTDFNDVQNLDDGILFPVEEIAQYPLPGYVSPTSISFSPDDSLISYLFSPDNTLNRKIFTFDLKTNKQELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTNSKRKTVMVPLPAGIYFHDISHSKAELKLPSIPASPIIDPHLSPDGSMLAYVRDYELYVMNLLSNESKQLTHGAKENVVIHGLAEYIAQEEMDRKTGYWWSLDCKYIAFTEVDYSEIPLFRIMHQGKSSVGTDAQEDHPYPFAGASNVKVRLGVVPVAGGSTTWMDLVCGGVKELDNEDEYLARVNWMHGNVLAAQIINRHQTKIKLVKFDIRTGEKRVILVEENKTWINIHDCFTPLDKGVTKFSGGFIWASEKSGFRHLYLHDANGNCLGPITEGEWMVEQIAGVNEATGLIYFTGTLDSPLESNLYCTKLFVDGTQPLQAPTRLTHSKGKHIVVLDHHMQTFVDLHDSLSCPPRVLLCSLEDGSIIMPLYEQPIPISKSKKLQLESPEIVEVQADDGTILYGALYKPDVSRFGPPPYKTMINVYGGPSVQLVSNSWQNTVDLRAQYLRNKGILVWKLDNRGTSRRGLKFESYLKHKLGQIDADDQFTGAEWLVKQGLAEFGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPATSWDGYDTFYTEKYMGLPSENKSGYVRASVMNHVHKLKGQLLLVHGMIDENVHFRHTARLINALVAAGKTYELIIFPDERHMPRRYSDRVYMEERMWEFIDRNL 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02157 754 Pfam Prolyl oligopeptidase family 555 754 IPR001375 GO:0006508|GO:0008236
Trre12g02157 754 SUPERFAMILY DPP6 N-terminal domain-like 32 492 - -
Trre12g02157 754 Gene3D alpha/beta hydrolase 497 753 IPR029058 -
Trre12g02157 754 SUPERFAMILY alpha/beta-Hydrolases 502 754 IPR029058 -
Trre12g02157 754 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 23 752 - -
Trre12g02157 754 Gene3D - 20 496 - -
Trre12g02157 754 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 116 468 IPR002469 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02157 Trre-Chr12 23289459 23294244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02157 496 752 Carbohydrate Esterase AT5G36210 24.074 9.77e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02157 K01278 - gmx:100812178 1350.88