Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02156 ATGAATGAGAAGAGGAATCCAAAGCGTCAAAAACCACTTCCTTTCAAAATGCCTGTGACAGACTTCAATGATGTGCAAAATCTCGATGACGGCATTCTTTTCCCTGTTGAAGAGATTGCGCAATACCCATTGCCTGGATATGTATCACCGACTTCAATAAGTTTTAGTCCAGATGATAGTTTGATTTCTTATTTATTTAGTCCTGATAATACATTAAACAGAAAGATTTTCACTTTTGATCTGAAGACCAATAAACAAGAATTGTTATTCAGCCCCCCTGATGGCGGACTTGATGAGAGTAATATTTCTCCAGAAGAAAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGAGTGACGCGGTACGAATGGGTGAAGACGAACTCAAAAAGGAAAACAGTCATGGTGCCATTACCTGCTGGGATTTATTTCCATGATATTTCCCATTCAAAAGCAGAGCTCAAGCTTCCAAGTATACCAGCTTCACCCATTATTGATCCACATTTGTCTCCAGATGGATCTATGCTTGCTTATGTAAGAGACTATGAGTTGTATGTTATGAATCTCTTGTCTAATGAATCAAAGCAGTTGACCCATGGCGCGAAGGAAAATGTCGTTATTCACGGGCTTGCCGAATATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACTGTAAATATATTGCTTTTACAGAAGTTGATTATTCTGAAATACCCCTTTTTAGAATTATGCACCAAGGTAAGAGCTCAGTTGGCACAGATGCACAGGAAGATCATCCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTACGGCTTGGGGTTGTTCCGGTAGCTGGAGGCTCCACCACTTGGATGGATCTTGTCTGCGGGGGTGTGAAAGAATTAGACAATGAGGATGAATATTTGGCAAGAGTTAATTGGATGCATGGAAATGTTCTCGCTGCTCAGATCATAAATAGACACCAGACTAAAATAAAGCTTGTTAAGTTTGATATTAGAACAGGAGAAAAGAGAGTGATATTGGTAGAAGAAAACAAAACTTGGATCAACATACATGATTGTTTCACACCTCTTGATAAAGGAGTTACCAAGTTTTCAGGTGGATTTATCTGGGCTAGTGAGAAATCAGGATTTAGACATCTCTATCTTCATGATGCAAATGGGAATTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATCGCCGGTGTGAATGAGGCAACAGGTCTAATATATTTCACCGGAACCTTAGATAGTCCTCTTGAATCCAACTTATACTGTACTAAACTTTTTGTCGATGGAACTCAACCACTTCAAGCCCCTACCAGACTTACACATAGCAAGGGAAAGCACATTGTGGTCCTTGACCATCATATGCAAACATTTGTTGATTTACATGACTCCCTTAGTTGTCCGCCTAGGGTATTACTTTGCTCGTTAGAGGATGGAAGCATAATCATGCCTTTGTATGAACAGCCAATACCAATTTCAAAATCCAAAAAGCTTCAACTTGAGTCTCCAGAGATTGTTGAAGTACAGGCTGACGATGGTACCATCTTATATGGAGCTCTTTATAAGCCTGATGTTTCAAGATTTGGACCTCCACCTTACAAAACGATGATCAATGTTTATGGTGGTCCAAGTGTACAGCTTGTTTCTAACTCTTGGCAAAATACAGTTGACCTGAGAGCACAATACTTGAGAAATAAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTTCTAGACGAGGGTTGAAGTTTGAAAGCTATTTGAAGCACAAACTTGGACAAATTGACGCTGATGATCAATTTACTGGAGCAGAGTGGCTTGTCAAACAAGGGCTTGCAGAATTTGGTCACATCGGGTTATACGGGTGGAGCTATGGCGGGTATCTCTCTGCTATGACATTGTCAAGGTATCCAGATTTCTTCAAGTGTGCTATAGCCGGTGCACCCGCTACATCATGGGATGGATACGACACATTCTACACTGAGAAGTACATGGGATTGCCATCTGAAAATAAATCAGGGTATGTAAGAGCTTCTGTGATGAACCATGTGCATAAGTTGAAAGGACAGTTGTTACTTGTGCATGGCATGATTGACGAGAATGTACATTTTCGACACACTGCAAGGCTTATAAATGCACTTGTGGCAGCTGGAAAAACGTATGAGCTGATAATATTCCCGGATGAGCGTCACATGCCTCGGCGATATAGCGATCGAGTTTATATGGAAGAGAGGATGTGGGAATTCATAGACAGGAATCTGTAA 2313 0.4094 MNEKRNPKRQKPLPFKMPVTDFNDVQNLDDGILFPVEEIAQYPLPGYVSPTSISFSPDDSLISYLFSPDNTLNRKIFTFDLKTNKQELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTNSKRKTVMVPLPAGIYFHDISHSKAELKLPSIPASPIIDPHLSPDGSMLAYVRDYELYVMNLLSNESKQLTHGAKENVVIHGLAEYIAQEEMDRKTGYWWSLDCKYIAFTEVDYSEIPLFRIMHQGKSSVGTDAQEDHPYPFAGASNVKVRLGVVPVAGGSTTWMDLVCGGVKELDNEDEYLARVNWMHGNVLAAQIINRHQTKIKLVKFDIRTGEKRVILVEENKTWINIHDCFTPLDKGVTKFSGGFIWASEKSGFRHLYLHDANGNCLGPITEGEWMVEQIAGVNEATGLIYFTGTLDSPLESNLYCTKLFVDGTQPLQAPTRLTHSKGKHIVVLDHHMQTFVDLHDSLSCPPRVLLCSLEDGSIIMPLYEQPIPISKSKKLQLESPEIVEVQADDGTILYGALYKPDVSRFGPPPYKTMINVYGGPSVQLVSNSWQNTVDLRAQYLRNKGILVWKLDNRGTSRRGLKFESYLKHKLGQIDADDQFTGAEWLVKQGLAEFGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPATSWDGYDTFYTEKYMGLPSENKSGYVRASVMNHVHKLKGQLLLVHGMIDENVHFRHTARLINALVAAGKTYELIIFPDERHMPRRYSDRVYMEERMWEFIDRNL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02156 770 Gene3D alpha/beta hydrolase 513 769 IPR029058 -
Trre12g02156 770 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 39 768 - -
Trre12g02156 770 Gene3D - 36 512 - -
Trre12g02156 770 SUPERFAMILY DPP6 N-terminal domain-like 48 508 - -
Trre12g02156 770 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 132 484 IPR002469 GO:0006508
Trre12g02156 770 SUPERFAMILY alpha/beta-Hydrolases 518 770 IPR029058 -
Trre12g02156 770 Pfam Prolyl oligopeptidase family 571 770 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02156 Trre-Chr12 23289459 23294292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02156 512 768 Carbohydrate Esterase AT5G36210 24.074 1.09e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02156 K01278 - gmx:100812178 1382.85