Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02144 ATGGTTTCAGTTTCGAAAATTGCGTTATCAGACAAACATCATGATAAAGGATTTCGATCACTACATTCTGGAGAAACTTACACTTTCCGTTTTAGACCCGATCCCTTTTTCTCAAGTACCTTATACTTTTGTGGATTTACATGGAACCCTCATAATGTACGCCACTTTGATGTTTATATTCAAGATCGAGATGCCACAAGTTGCGTAAAAGAATGCCGCTATGAAGTACATCAATCGGGACCATGTAGGATTAAGAATAATTCGATCGGGCCAAAATCTGTAGAATGCTTTGAATGGAATAAGTAA 306 0.3725 MVSVSKIALSDKHHDKGFRSLHSGETYTFRFRPDPFFSSTLYFCGFTWNPHNVRHFDVYIQDRDATSCVKECRYEVHQSGPCRIKNNSIGPKSVECFEWNK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02144 101 PANTHER - 10 86 IPR010264 -
Trre12g02144 101 Pfam Plant self-incompatibility protein S1 12 99 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02144 Trre-Chr12 23199907 23200334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02144 12 88 Carbohydrate Esterase AT3G16970 37.500 3.96e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02144 - - cam:101489286 102.834