Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02064 ATGGAATTTAATAATGGTAAAAAGAATCATAGCTACACATTTAAAGAACTGAAGTTGGTTTCTTTTGTTGCTTTATGCCTCATTCTAATCTCTCCTGCTGAGGCATTTGATCCATTGGATCCAACTGGAAATGTGACAATAAGATGGGATATCATGTCTTGGACATCTGATGGTTATATGGCAACTGTAACATTATTTAACTTTCAACTATACCGAAATATTATGAGCCCGGGATGGACACTAGGATGGACATGGGCGAAAAAAGAAATCATATGGGCCATGATGGGAGCACAAGCTACAGAACAAGGAGACTGTGCAAAGTTCAAGTTAAAGATTCCTCATAGTTGCAAAAGAAGTCCTCAAGTTGTTGATTTATTACCAGGAGCATCTTTCAATATGCAATACACAAATTGTTGCAAAGGTGGTGTGTTAACTTCTTGGGGACAAGATACTTCAGGTGCAATCTCAGCATTTCAGATGGGTGTAGGACTCTCTGGAAGAACTAACAAGACAGTGAAACTACCTCAGGATTTTAAATTGCTTGGACCCGGAGCCGGTTATTCGTGTGGCCCTGCTAAGAGAGTTCCTTCAACTGTTATTCTTACCGATGATCGTAGGCGAAAAGCTCAAGCTTTGATGTCCTGGAATGTGACATGTACTTATTCACAATTTCTTGCCTCCAAGAACCCTAGCTGTTGTGTTTCTTTGTCAACCTTCTACAATGACCAAGTCACAGCTTGCCCAACATGTGCTTGTGGTTGTCAAAATAATGCTACTTGCGTCACGAAAGAATCAAAGATACTGAAAGAGGCTGAGAATAATAAGACTAGGAAGGGTGATATTATGACACCAAAACCGTTATTACAATGTACACGCCACCTTTGTCCGGTTCGCGTACATTGGCATATAAAAGATAACTATAAGGATTATTGGCGTGTGAAGATCGCAATCATCAACTTCAACTATAGAATGAATTACACACAATGGGGTCTTGTTGTTCAACACCCTAATCTTAATAATGTTACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATCAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAATACTACAATGATCTATTAATGGAAGCTGGTGCTAAAGGGAATGTACAATCTGAGGTACTTATGAAGAAGGACAAGAACACCTTTTCACTCAAGCAAGGATGGGCTTTTCCTAGAAGGGTATACTTCAATGGTGATGAATGTATGCTACCACCTCCTGATTCATATCCATTTTTGCCAAATTCTGCTCATAGGTTACCATCAAGTGTTGTAACAATGGTAGCATATGTCATTTTTGCTTCATTTTTCATTTGGTTCTGA 1362 0.3899 MEFNNGKKNHSYTFKELKLVSFVALCLILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMSPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRSPQVVDLLPGASFNMQYTNCCKGGVLTSWGQDTSGAISAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSTFYNDQVTACPTCACGCQNNATCVTKESKILKEAENNKTRKGDIMTPKPLLQCTRHLCPVRVHWHIKDNYKDYWRVKIAIINFNYRMNYTQWGLVVQHPNLNNVTQVYSFEYMPLLPYQAINDTGMFYGLKYYNDLLMEAGAKGNVQSEVLMKKDKNTFSLKQGWAFPRRVYFNGDECMLPPPDSYPFLPNSAHRLPSSVVTMVAYVIFASFFIWF 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02064 453 PIRSF COBRA 10 453 IPR006918 GO:0010215|GO:0016020
Trre12g02064 453 PANTHER PROTEIN COBRA 23 443 IPR006918 GO:0010215|GO:0016020
Trre12g02064 453 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02064 Trre-Chr12 21918719 21921531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02064 19 447 COBRA Gene Family AT3G02210 58.199 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02064 - - gmx:100813134 816.224