Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02063 ATGGAGTCTATTATAGTTTTAGTCTTGTTACTTTTCTCTTGCTCCACATTCACTTCCACAGAAGCCTATGATCCGTTAGATCCAACCGGAAATATAACACTCAAATGGGATGTCATGAGTTGGACTGCAGATGGCTATGTTGCTATTGTTACAATGTACAACTTTCAACAATATCGACATATTCAAGAGCCAGGATGGACACTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAAGCCAAACAACCGAACAAGGAGATTGTTCGAAATTCAAAGCTGGAACTCCACATTGTTGTAAGAAAGATCCAACCGTAGTTGATATGTTGCCAGGAACTCCTTACAACCAACAAATTGCAAATTGTTGCAAAGGTGGAGTCTTGAATTCATGGGCTCAAGATCCAAGCAATGCAGTAAGTTCTTTTCAACTCAGTGTTGGTTCTGCCGGAACAACGAATAAAACGGTAAAACTTCCAAAGAATTTCACACTCAGAGCACCTGGTCCTGGTTATACTTGTGGTCCTGCGAAAATTGTTAGACCAACTCAATTTATTACTAGTGATAAGAGGAGAGTGACACAAGCCTTGATGACATGGAACATTACTTGTACTTACTCTCAATTCTTGGCTCAAAAGACACCAACTTGTTGTGTTTCACTCTCATCCTTCTATAATGACACGGTAGTAAACTGCCCAACCTGCACATGTGGCTGCCAAAACAAAACACAACCTGACAGTTGTGTAAATCGAGACTCTCCACATTTATCTTCAATAGTATCATCATCAGGAAAACCTGCAAATACACCTCTAGTCCAATGTACAAGTCACATGTGTCCGATACGAGTGCATTGGCACGTGAAGCTGAATTATAAAGAGTATTGGAGAATCAAGATCACAATCACAAATTTCAATTACAGAATGAACTACTCACAATGGAATCTTGTGGTGCAACATCCCAATTTTGATAATCTTACTCAGCTTTTCAGCTTTAAGTACAAGTCACTAAATCCCTATGAGGGCTTAAATGATACTGGTATGTTGTGGGGGGTAAAATTCTACAATGATTTTCTTTCATCGGCTGGATCATTGGGAAATGTTCAATCTGAAATCTTATTTAGAAAAGACAAATCAACTTTCACATTTGATAAGGGATGGGCCTTTCCACGAAGAATTTATTTCAACGGTGATAACTGTGTTATGCCTCCTCCAGATGCATACCCTTGGTCACCAAATGCATCTTCGCAACTTGTTTTTTCTTTACTTAGTACACTCGTAGCCACTTTAGCTTCTTTATTAATCATATTGAATTGA 1320 0.3902 MESIIVLVLLLFSCSTFTSTEAYDPLDPTGNITLKWDVMSWTADGYVAIVTMYNFQQYRHIQEPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKAGTPHCCKKDPTVVDMLPGTPYNQQIANCCKGGVLNSWAQDPSNAVSSFQLSVGSAGTTNKTVKLPKNFTLRAPGPGYTCGPAKIVRPTQFITSDKRRVTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTVVNCPTCTCGCQNKTQPDSCVNRDSPHLSSIVSSSGKPANTPLVQCTSHMCPIRVHWHVKLNYKEYWRIKITITNFNYRMNYSQWNLVVQHPNFDNLTQLFSFKYKSLNPYEGLNDTGMLWGVKFYNDFLSSAGSLGNVQSEILFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWSPNASSQLVFSLLSTLVATLASLLIILN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02063 439 PIRSF COBRA 1 439 IPR006918 GO:0010215|GO:0016020
Trre12g02063 439 Pfam COBRA-like protein 46 209 IPR006918 GO:0010215|GO:0016020
Trre12g02063 439 PANTHER PROTEIN COBRA 11 428 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02063 Trre-Chr12 21914730 21917924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02063 6 438 COBRA Gene Family AT3G02210 72.581 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02063 - - gmx:100815779 837.41