Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02053 ATGCATCATTTTGTAAATGATTTAGCTCAATTTGTATCTGGAAAATTTTCTGTCAGAGTAGAAGGAAATTACGGTGAAGTGGAAGAGAGTGCTCGGTATTTGTTGCATTTGATTGCACATAAATTCCCTGCTGTACATTGGAAGGCTATTCGCAAAGCTATTCACTTAAGAACCTTCATGGAATTAAGGTTAGTAGATAAATCCGTGAGCTTTATTGATGAGATTCCACATGACTTGTTGATCAAGCTAAAGTGTTTAAGGGTGTTATCTTTGGAAGGAATCTATCTTAAGGGGTTGCCTGATTCAGTTACCGAATTAATACATCTTCGGTATCTCGATCTTTCTGGGGCTAAGATGAACATGTTGTGGGAAAGCATCGGTAGTTTGTACAATTTGGAAACTCTGAAGCTGGTTGGATGTTCTAACCTACAAGAACTTCCTAAAGATTTCCATAAGCTAGTTAACCTGCGTTACTTAGATATTCGTTGTACGAGTTTGAAATGGATGCCGTTGTTTATGAGTGCATTGACAAACCTACAAAATCTAAGTGACTTTTTTGTAGGAAAAGAATATGGATCTTCAATTGGTGAACTAGGAGAATTGTCTGATTTACATGGATCATTGTTCATTCACAATATTGAACATGTTAGCTTTGTGGATTCTGAAAAGGCCAAGTTGAACGAAAAGGCATTTCTCGAAAAGTTAACTTTGGAATGGGGTGAGAATTCTGATACCGATAATTCACAGCAAGAAAAAGAAATACTAAACATGTTACAACCACATACAAATCTTAAAGAGCTTTCTATATATAACTACCTAGGGACAGAATTTTCTGATTGGGTGGGAAACTCTATCTTCCGCAACATGTTGTTCATCGACCTTAAGGGTAGTAAATATTGCTGTAAACTACCTACACTAGGGAAACTTCCATGTTTGAAAGAGTTACGGATTGCTAAATTCGATGGATTAGTGAGTGTGGGGTCTGAGTTTTATGGGAATGAAACTTGTTCTTCTGTTGTAACCGAGAGCTTTGGTTCCTTAGAAACTCTTCGGATTGAGAACATGTCAGCATGGGAGGATTGGAACCAACCTAATGAGGCTAACAAAGCTTTTGCAGTATTGAAAGAACTCCATATAAATAGTTGTCCTAGATTGACAGGAGACTTACCGATTAACCTTCCATCATTGACATTACTTGTCATCAGAGATTGCAAGAAGCTCATTTCATCGCTTCCGACAACTTCAGCTTTGCAAGTATTTAACATTGACAACTGTGGTAACTTAAAATTCCCATCTCGTGTATATCAGTTCAACCATACACTCACATCCATGTACTTGCACAATAGCTTTGATTCGCTTGAGCTATTGTCGTTAGATATCTTTCCAAACCTCAAGTCCCTTTATGTTTCTGGTTGTAAAACTCTAAAAGCAATTACAATTTCAGGGAAAATGCGACTCCGACCTCCAATTCTTGATTCCTTGTGTTCCTTGTCCATAAGTAACTGTCCAAAGTTGGTATGCTTTCCAACAGAAGGGTTCTTTGCCCCAAAGCTCACGTTGTTGAGTATTGACAACTGCGAGGAGCTCAAGTCCCTTCCGCCGAAAATGGACCACCATATGCCAAGCTTGATAGAACTACAACTATGGAGATGTCCACAACTTCAGCCAATTGAAAAGTGGCCTACTGATTTGAGATCAGTCAGTATCTACAACTGTGATCAACTCGTTGCCCGTCAGTTAGAGTGGAAACAATCCAATCCCATCGATTTTACAGACTTAACAGCGTCTCCAGCTTTCACTGTCAAATCTGAAGATTGCTTCTCAACAATTACCAGTTCAACTCTTGTCTCTGATAGGAAAGCATTATCAAGCTCTTCTCAGAAAAAATCGTTTGTTAAAAGAGTATTCAGATGA 1914 0.3845 MHHFVNDLAQFVSGKFSVRVEGNYGEVEESARYLLHLIAHKFPAVHWKAIRKAIHLRTFMELRLVDKSVSFIDEIPHDLLIKLKCLRVLSLEGIYLKGLPDSVTELIHLRYLDLSGAKMNMLWESIGSLYNLETLKLVGCSNLQELPKDFHKLVNLRYLDIRCTSLKWMPLFMSALTNLQNLSDFFVGKEYGSSIGELGELSDLHGSLFIHNIEHVSFVDSEKAKLNEKAFLEKLTLEWGENSDTDNSQQEKEILNMLQPHTNLKELSIYNYLGTEFSDWVGNSIFRNMLFIDLKGSKYCCKLPTLGKLPCLKELRIAKFDGLVSVGSEFYGNETCSSVVTESFGSLETLRIENMSAWEDWNQPNEANKAFAVLKELHINSCPRLTGDLPINLPSLTLLVIRDCKKLISSLPTTSALQVFNIDNCGNLKFPSRVYQFNHTLTSMYLHNSFDSLELLSLDIFPNLKSLYVSGCKTLKAITISGKMRLRPPILDSLCSLSISNCPKLVCFPTEGFFAPKLTLLSIDNCEELKSLPPKMDHHMPSLIELQLWRCPQLQPIEKWPTDLRSVSIYNCDQLVARQLEWKQSNPIDFTDLTASPAFTVKSEDCFSTITSSTLVSDRKALSSSSQKKSFVKRVFR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02053 637 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 395 612 - -
Trre12g02053 637 SUPERFAMILY L domain-like 56 476 - -
Trre12g02053 637 Gene3D Ribonuclease Inhibitor 48 409 IPR032675 -
Trre12g02053 637 Gene3D Ribonuclease Inhibitor 410 598 IPR032675 -
Trre12g02053 637 SUPERFAMILY L domain-like 452 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02053 Trre-Chr12 21836908 21838821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02053 86 182 WRKY Transcription Factor Family AT4G12020 34.694 4.13e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02053 - - vum:124831962 600.512