Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02044 ATGATGAGGCTTTGTTTTTCATTTCTTTGTGTTCTTGTGCTATCCTCTTATGCTGTTGCTTATGATCCTTTGGATCAAAAGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATTTCATGGACAGAAGATGGTTATGTGGCGACGGTAAAAATAAACAATTTCCAAAAGTTTCGACAAATAAAGAATCCGGGATGGACATTAGGATGGACTTGGGCTAAGAAAGAAATTATATGGAATATGATAGGAGCTGAAACAACAGAACAAGGTGATTGTTCTAAGTTCAAAAGATACACACCTCTTCCTCGTTGCTGCAAGAAAATCCCTACAGTTGTAGACCTTCTCCCAAGTGTACCTTACTATCGGCAATTCCCGAACTGTTGTAAAGGCGGCGTGGTTGCAGCATTTGGACAATCAGAATTTGAAGCTACTATAGGACAAGCTGGTAACACAAGCAAAACAGTTAGACTTCCACAGAATTTCACTCTTTTGGCTCCAGGAGCTCGATATACTTGTCGCCCTGCAAAGATTGTTCCTTCCACCATTTATATTTCTCCTGATAAGCGCCACACGACTCGAGCTTTCATGACATGGGATGCTATCTGCAAATACACAAAAGGTTAA 627 0.4003 MMRLCFSFLCVLVLSSYAVAYDPLDQKDPNGNITIKWDVISWTEDGYVATVKINNFQKFRQIKNPGWTLGWTWAKKEIIWNMIGAETTEQGDCSKFKRYTPLPRCCKKIPTVVDLLPSVPYYRQFPNCCKGGVVAAFGQSEFEATIGQAGNTSKTVRLPQNFTLLAPGARYTCRPAKIVPSTIYISPDKRHTTRAFMTWDAICKYTKG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02044 208 Pfam COBRA-like protein 47 206 IPR006918 GO:0010215|GO:0016020
Trre12g02044 208 PANTHER PROTEIN COBRA 7 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02044 Trre-Chr12 21768684 21770091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g02044 18 207 COBRA Gene Family AT5G15630 65.816 7.71e-93 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02044 - - gmx:100798678 306.219