Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g02034 ATGTCGGACGAAGGCGAACCACATCGCCAAATTGTGTTGGGCATCAATGCACCAGGCATTGTTGAGTTTAAACCTTCGGGTTCAAAGCCTCCTGTCATTGAGATCGACACAGGAGCACACTTTCAGACTACAGAGGGAAATGAAGACCGCAATGTATTAATTGAATGGGCTCGTAAAGTCGCCGTGAAGTTGAATTTTGGGATTATAATTGGGAAATCTGATTTTGGTGATAATAGACGGAAACCGTATTTCATGTTGGTTTGCGAGCGAAGCGGTACCTATGTTTCAAAAGGCAAGAAGTTGAAAACGGAAAAAACCGGGACGAGGAAATGCCAATGTCCCTTTCGTCTCCGTGGTTACTTTCATGTAACCGATAAAAAATGGTACATGACCGTTGTCAACGGCACACACAACCACGAGCTGGATAAAGGACTTGAAGGGCATTTGATTGTTGGTCGATTGAAGCGGAACGAGAAGGAGACTATGGATGAATTGACTCGGAATTTGGTGGCGCCAAAAAATATACTTGCCACTTTGAAGGAGAGAGATCTGGAGAACAAGACCAACCAAAGACAAATTTACAATGCTCGTTATCGTTTGAAAGTTTCTATGCGGGCTTCAATGACCGAAATGCAACACCTATTCAAGAAGTTCGCCGAAAAAAATTATTTTTTCAAGACGCGGTCGGTTGATCAAGAATGA 702 0.4316 MSDEGEPHRQIVLGINAPGIVEFKPSGSKPPVIEIDTGAHFQTTEGNEDRNVLIEWARKVAVKLNFGIIIGKSDFGDNRRKPYFMLVCERSGTYVSKGKKLKTEKTGTRKCQCPFRLRGYFHVTDKKWYMTVVNGTHNHELDKGLEGHLIVGRLKRNEKETMDELTRNLVAPKNILATLKERDLENKTNQRQIYNARYRLKVSMRASMTEMQHLFKKFAEKNYFFKTRSVDQE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g02034 233 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 85 204 IPR010061 GO:0004491
Trre12g02034 233 Pfam Transcription factor AFT 96 141 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g02034 Trre-Chr12 21683508 21684209 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre12g02034 AFT 2.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g02034 - - tpra:123905216 280.796