Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01973 ATGATGGAAGGTTGTTCTAGAGATGTGGAAGGTGAAGAAGAGGATTCAATGAAAGCATCATTCGGGGAAGATGTGGAAGGTGAAGAAAAGGATTCAATGAAAGCAGCATCGAGGGAAGGGATTAGTTTGGTTATCAATTCATGGTGGCTGATTCGAAGATTTGTTCGCAGGGCCAGGGGAGACGATGGCCTTCAGCCCGAGCTAAAACTCAACGGCCTTTATGACTGCCTTTTTTCTTGTTTGATTCAATCCAATGACCTGCCTTCTGCAAAAATTGCACTCAAGGCACACCTTACTTCTTTCCTTGGAGATATTACTGATCCTCTTCCTGATAACAGCCTTCAAGAGGTCTGTGAGCAACTAGTGGCCATGTACCAAGAATGTTTACAAGGTGACTTAAGCTCTATTCAGATTATCAAGGAAGCCAATTCTTGGAAAAAAGCTAATAATAAATATGAAGTGGAAACCGACGACCCCTTTTTTGAGAGAAGAAGGAAGCAAGCCCTTATTACCGCACGAGATCGTGTATGGGAAGAAATGCTTTTTGAAGCGAGAATCAAGTATCTTAAGAAGATAAAGAAATTCAAGAAAGCTCGTCTTTTAATACGAGGGAGGAAACAAAAGATGGAAAGTAAGTTTCAAATGGAAACTCCCTCCGCTATCTCTATTCAGCTTACCCAGAAAGCCAACATTAGCTCTCCTCTATTGTACAAACAGGCTAATTCGTCTGAGATGGACGGGATCAGAGTGTTTAAAGAAGGGGTTGATTTGCTTATGAACAATTTGTGGCTCTACATCCCGTGTGGCTGTGGCTCTACATCCAATTCCAGTCACTCCCGAATGATTCAACGACTTGCTGATTACATCCTCTTTTGGTTCACTCAAACCATAAAGCCGGTTTCTTTTGATTATATAGAATGGATACTCAGGAATGAATTGTGTTCTCTCCATATCACGGTTGGTGCCGTTACTAATGACATCACAAAAGAGGTAGCTGAGAAACTCATGGTTATGTATGAGGAATGCTTAAAAGGTAATTTTACCTCTGTCAAGATACTCAGGGAGGAAAACCTGTGTTCGCCGAGCTGCTCAACCTCATGTAATGAAACTACAGCTTGCTTGGACCCAGACCAGTTCAGGGAGTTTAAACTTGTCAAGAAAGCACAGCTGGGCCATAATGTTGCAAAGTTCACTTTTGCACTCCCAACACCTACTTCTGTTTTGGGTCTTCCAATTGGACAACATATATGTTGCAGGGGTAAGGATGGTCAAGTTATCAAGAGGCACCCTCAAGCAAGGATGTCATGCTATTTCCATGAGATGCGTGTTGGTGACTATCTTGCTGTCAAAGGACCAAAGGGACGTTTCAAGTACCAACCGGGTGAGGTTAGAGCATTTGGGATGCTAGCTGCAGGCTCTGGAATCACTCCAATGTTCCAAGTTGCTCGAGCTATATTAGAAAACCCAAATGACAAGACCGAGGTGCACCTTATCTATGCCAATGTTACATTTGAGGACATTCTCTTGAAGGAAGAACTTGATGGTCTTGCTACTAACTATCCAGACCGTTTTAAAATATACTATGTGTTGAATCAGCCTCCTGCGGTATGGGATGGCGGTGTCGGATTTGTTTCAAAAGAGATGATTCAAGCACATTTGCCTCCTCCAGCACAAGATATTAAGATATTGAAATGTGTGCCACCACCAATGAAAAAGGCTGTGGCTGCTCACCTGAAAGCCCTCGATTATGCTCCCGAGATGCACGATGAAGAGGATTGGTCTAAAGTTGGTTTCTCTCTTTCTGATGATGAATCCGAAGGTGAATCGGAGAAACCTAAACGAAAGAAAGAAGCTTCCCAAACTAAACGTCCTTCTTCTTCTGTTGCTGCTAAACTCTCAGATTAA 1905 0.4273 MMEGCSRDVEGEEEDSMKASFGEDVEGEEKDSMKAASREGISLVINSWWLIRRFVRRARGDDGLQPELKLNGLYDCLFSCLIQSNDLPSAKIALKAHLTSFLGDITDPLPDNSLQEVCEQLVAMYQECLQGDLSSIQIIKEANSWKKANNKYEVETDDPFFERRRKQALITARDRVWEEMLFEARIKYLKKIKKFKKARLLIRGRKQKMESKFQMETPSAISIQLTQKANISSPLLYKQANSSEMDGIRVFKEGVDLLMNNLWLYIPCGCGSTSNSSHSRMIQRLADYILFWFTQTIKPVSFDYIEWILRNELCSLHITVGAVTNDITKEVAEKLMVMYEECLKGNFTSVKILREENLCSPSCSTSCNETTACLDPDQFREFKLVKKAQLGHNVAKFTFALPTPTSVLGLPIGQHICCRGKDGQVIKRHPQARMSCYFHEMRVGDYLAVKGPKGRFKYQPGEVRAFGMLAAGSGITPMFQVARAILENPNDKTEVHLIYANVTFEDILLKEELDGLATNYPDRFKIYYVLNQPPAVWDGGVGFVSKEMIQAHLPPPAQDIKILKCVPPPMKKAVAAHLKALDYAPEMHDEEDWSKVGFSLSDDESEGESEKPKRKKEASQTKRPSSSVAAKLSD 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01973 634 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 447 587 IPR039261 -
Trre12g01973 634 Gene3D Translation factors 368 429 - -
Trre12g01973 634 FunFam NADH-cytochrome b5 reductase 449 590 - -
Trre12g01973 634 MobiDBLite consensus disorder prediction 588 634 - -
Trre12g01973 634 SUPERFAMILY Riboflavin synthase domain-like 373 460 IPR017938 -
Trre12g01973 634 Gene3D - 447 588 IPR039261 -
Trre12g01973 634 PANTHER NADH-CYTOCHROME B5 REDUCTASE 364 421 IPR001834 GO:0016491
Trre12g01973 634 MobiDBLite consensus disorder prediction 1 32 - -
Trre12g01973 634 CDD cyt_b5_reduct_like 382 587 - -
Trre12g01973 634 Pfam Oxidoreductase NAD-binding domain 468 575 IPR001433 GO:0016491
Trre12g01973 634 MobiDBLite consensus disorder prediction 588 621 - -
Trre12g01973 634 Pfam Oxidoreductase FAD-binding domain 382 423 IPR008333 -
Trre12g01973 634 Pfam Oxidoreductase FAD-binding domain 425 458 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01973 Trre-Chr12 20514227 20523375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01973 365 587 NADPH P450 reductases AT5G17770 71.020 3.41e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01973 K00326 - gmx:100805390 372.474