Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01826 ATGGACTCCGAGACATTCCAACGACGCCGTCGAACCAATTCCACTCACAACAAAAACAACGCCGTCGTAGGAGAGGAAAGGTTGAACCGGAGTGAGGTACTCGCAAAGAAGAAAGCCATTGAACAACTCATCAAAGCAGCAAATTCCAAAATTGATCAACTCGCATTTTTCCCCTCTTATCGCCACTTCAAAATTAACGGTCTGTCGGTGTGTTTGAATTCGGGACATGGCAATAAACTTTCCTCTCCTGTTAAACGTTATATTCAGAATCTCCTTAAGCTTAACATGGAAGGGCCATATGGATCTGAGTGGCAAGAGGAAGAAAAGGTGAAGCGTAGAGAAATGGTTGATCCTGAAGCGCGCTATATATTTGTGCATGAGGTTGTTAATTCAAATGCTGATGACATGACAACGGTGTTGACTGAGGAAGATACTTCAACAAGTCGTCAAGAAGATAGTGGCCCCTTGGTTGGATTTGTACATTACCGCTTTGTTTTGGAAGAAGATGTACCGGTGCTTTATGTGTATGAACTACAGCTTGAGTCTCGTGTCCAGGGGAAAGGATTGGGAAAGTTTCTAATGGAATTTATCGAGCTTATCGCCCAAAAGAACTGCATGGGTGCTGTCATGCTAACTGTTCAAAAGGCAAACTTATCAGCTATGAGTTTCTATATGAGTAAGCTAAGATATATCATATCAGCCACGTCGCCTTCTAAGGTTAATCCAATGCTGGAGAAGAGTTATGAAATTCTTTGCAGAACATTTGATGAAGAAGCTAAAACCATTTTGGAGGTAAAGCACTCAGTACACCATTAG 816 0.4203 MDSETFQRRRRTNSTHNKNNAVVGEERLNRSEVLAKKKAIEQLIKAANSKIDQLAFFPSYRHFKINGLSVCLNSGHGNKLSSPVKRYIQNLLKLNMEGPYGSEWQEEEKVKRREMVDPEARYIFVHEVVNSNADDMTTVLTEEDTSTSRQEDSGPLVGFVHYRFVLEEDVPVLYVYELQLESRVQGKGLGKFLMEFIELIAQKNCMGAVMLTVQKANLSAMSFYMSKLRYIISATSPSKVNPMLEKSYEILCRTFDEEAKTILEVKHSVHH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01826 271 Gene3D - 61 257 - -
Trre12g01826 271 CDD NAT_SF 151 212 - -
Trre12g01826 271 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 108 251 IPR000182 GO:0016747
Trre12g01826 271 PANTHER N-ALPHA-ACETYLTRANSFERASE 40 25 267 IPR039949 GO:0010485|GO:0043998
Trre12g01826 271 Pfam Acetyltransferase (GNAT) family 137 225 IPR000182 GO:0016747
Trre12g01826 271 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 133 226 IPR016181 -
Trre12g01826 271 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01826 Trre-Chr12 18438236 18441745 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre12g01826 Acetyltransf_1 8.5e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01826 K20794 - gmx:100500318 347.436