Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01793 ATGCATGACTTGATTGAGGATATGGGTAGAGAAATTGTTCGCCATGAATCGCCCAAAGAACTTGGAAAACGTAGTAGGTTGTGGTTCCATAAAGATATTGTTGAAGTTTTGGAAGAAAATTTGGGAACTAGCAAAATTGAAATGATATGTCTAGATTCCTCCTCAATTGAAGTGCATACTACTGAATCAGGAATTGCATGA 201 0.3682 MHDLIEDMGREIVRHESPKELGKRSRLWFHKDIVEVLEENLGTSKIEMICLDSSSIEVHTTESGIA 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01793 66 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 52 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01793 Trre-Chr12 18061719 18063272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01793 1 52 WRKY Transcription Factor Family AT4G12020 50.000 5.31e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01793 - - gmx:100780257 90.5077