Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01751 ATGGAGAGGCTGCAAAATGGGAAGAGGGTTCTTAACCAAGCATCTAGTTTATCTGGCTACCATTACAACCTTCGGTACCCTACATCTCCTATTGGAATTCCAATCATAAAGCAATTGTTTGTTTATTTCTTAAACATTCTTCTCCAGTTTAGGTTAGTCTATGTTTCCCCAGAGTCATGGGTGGTTGGTGCTGGAGATTTAGTTGATGTACCAAAGAAAATTGCTGTCTATTACCTGAAGAGTTATTTTCTTATTGATTTGTTTGTTGTATTGCCTCTTCCTCAAGTTAAGTTTTTCTTCTCTTCCTCTATTCTTTATGGAATTTTTTTTTCTTCCTTTTCTAGGCCTAATGCATGTTTAAATTTAAGTTGA 372 0.3548 MERLQNGKRVLNQASSLSGYHYNLRYPTSPIGIPIIKQLFVYFLNILLQFRLVYVSPESWVVGAGDLVDVPKKIAVYYLKSYFLIDLFVVLPLPQVKFFFSSSILYGIFFSSFSRPNACLNLS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01751 123 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 40 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01751 Trre-Chr12 17561961 17562988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01751 41 96 Ion Channels AT3G17690 60.714 9.61e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01751 K05391 - vum:124819897 99.3673