Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01745 ATGGTCGCAATTTTTGTGGATCCATTATTTTTATTTTTAATATATGTGCAGAAGGATTTTAATTGTATTGCTATCAACCGGACAATGACAGAAACACTAGTTTTACTTAGAAGCATGAATGATTTTGTCTATTTCTCAAACATTCTTCTCCAGTTTAGGTTAGCTTATGTTTCTCCAGAATCAACGGTGGTTGGCGCTGGAGATTTAGTTGATGTATTAAAGAAAATTGGTGTCTATTACCTGAAGAGTTATTTTCTTATTGATTTGTTTGTTGTAATATTGCCTCTTCCTCAAAAACAAATTCAGGAACAAGTCAAATTAAAATTATACATTTGA 336 0.3095 MVAIFVDPLFLFLIYVQKDFNCIAINRTMTETLVLLRSMNDFVYFSNILLQFRLAYVSPESTVVGAGDLVDVLKKIGVYYLKSYFLIDLFVVILPLPQKQIQEQVKLKLYI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01745 111 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01745 Trre-Chr12 17424021 17430265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01745 1 109 Ion Channels AT3G17690 54.128 4.18e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01745 K05391 - ccaj:109789004 152.525