Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01743 ATGGAGTCATATGAGAAAGAAACTAGTCTAAAAAAGGAACATGTTGGTGCACTCTGTAGTGTAGTTGTGATAGGAAACAAAGTAGAGAATTTCAAGAAAGAAAAAGTTTCTCCTTTCCATGTCACATGTGATGGAGAAAATGAACATTTAGGGAAGTCTGGAGCATTGGGAATGTGTGATGATCCTTATTGTACTATTTGTCCTACTTACTTCAAGGCTTATCAACAAAGTAATCCAAGAGATTCAACTGAATATGATCCCAACGTATCTGACACGTGTCATACTACACCGAAAATGATTCTCAATTTCGTGTGGGAAGTCGTTTTCGCAATTTCCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAACATACAAAACTTTCTTCAAGGTCTTGGAAGAAGAAGGCTAGAAATGCTACTTAGAAGTCGTGATGTTGAGCAATGGATGAGGCATCGTCGCTTACCTGAAAATCTAAAAAGGTTCGGAATAAAATGCTATAGCTGA 516 0.3779 MESYEKETSLKKEHVGALCSVVVIGNKVENFKKEKVSPFHVTCDGENEHLGKSGALGMCDDPYCTICPTYFKAYQQSNPRDSTEYDPNVSDTCHTTPKMILNFVWEVVFAISIIGLGLLLFALLIGNIQNFLQGLGRRRLEMLLRSRDVEQWMRHRRLPENLKRFGIKCYS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01743 171 SUPERFAMILY Voltage-gated potassium channels 104 164 - -
Trre12g01743 171 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 102 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01743 Trre-Chr12 17418194 17419170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01743 46 71 Ion Channels AT3G17690 61.538 9.49e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01743 K05391 - gsj:114390051 87.0409