Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01742 ATGGAGTCATATGAGAAAGAAACTAGTCTAAAAAAGGAACATGTTGGTGCACTCTGTAGTGTAGTTGTGATAGGAAACAAAGTAGAGAATTTCAAGAAAGAAAAAGTTTCTCCTTTCCATGTCACATGTGATGGAGAAAATGAACATTTAGGGAAGTCTGGAGCATTGGGAATGTGTGATGATCCTTATTGTACTATTTGTCCTACTTACTTCAAGGCTTATCAACAAAGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAACATACAAAACTTTCTTCAAGGTCTTGGAAGAAGAAGGCTAGAAATGCTACTTAGAAGTCGTGATGTTGAGCAATGGATGAGGCATCGTCGCTTACCTGAAAATCTAAAAAGGTTCGGAATAAAATGCTATAGCTGA 402 0.3731 MESYEKETSLKKEHVGALCSVVVIGNKVENFKKEKVSPFHVTCDGENEHLGKSGALGMCDDPYCTICPTYFKAYQQRLGLLLFALLIGNIQNFLQGLGRRRLEMLLRSRDVEQWMRHRRLPENLKRFGIKCYS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01742 133 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 71 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01742 Trre-Chr12 17418194 17419170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01742 46 78 Ion Channels AT3G17690 51.515 1.59e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01742 K05391 - gsj:114390051 74.3294