Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01738 ATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTCAAAAAGAGAGTACGGCAGGCTGAACGATGGGATTCCGGTTCTGTTATCCGAAGGGGATGCTTGCGGCGAAGAACTTATCTTGAACAGTCTTCTGAAAACAAAGAAGGTAATAAAGTAAAGCTTCAAGGACAAGGGTTGACCAGTGACATAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTCCGCACTAAAGACATTGAAGAAGTTACAACTCTTTTCGCAAGATTCTTGAGGAGCCGTCGTGTTCAAGGAGTCATAAGGTATGAATCACCATATTGGAGATCACTAGCTGCAAACAGAATTCAGGTTGGATGGAGATACAGGAAGAAGCGTCTAAGTCGAGCTAATACCACACAAAATGATTATCAAACATTGAAATCATGGGCTAGCTGA 555 0.4306 MSIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLKKRVRQAERWDSGSVIRRGCLRRRTYLEQSSENKEGNKVKLQGQGLTSDITVRCLTNVEAFSLRTKDIEEVTTLFARFLRSRRVQGVIRYESPYWRSLAANRIQVGWRYRKKRLSRANTTQNDYQTLKSWAS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01738 184 SUPERFAMILY Voltage-gated potassium channels 3 58 - -
Trre12g01738 184 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01738 Trre-Chr12 17362478 17364257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01738 1 57 Ion Channels AT3G17690 77.193 1.25e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01738 K05391 - zju:125422339 165.236