Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01737 ATGTCCATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTCAAAAAGAGAGTACGGCAGGCTGAACGGGGATGCTTGCGGCGAAGAACTTATCTTGAACAGTCTTCTGAAAACAAAGAAGGTAATAAAGTAAAGCTTCAAGGACAAGGGTTGACCAGTGACATAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTCCGCACTAAAGACATTGAAGAAGTTACAACTCTTTTCGCAAGATTCTTGAGGAGCCGTCGTGTTCAAGGAGTCATAAGGTATGAATCACCATATTGGAGATCACTAGCTGCAAACAGAATTCAGGTTGGATGGAGATACAGGAAGAAGCGTCTAAGTCGAGCTAATACCACACAAAATGATTATCAAACATTGAAATCATGGGCTAGCTGA 528 0.428 MSIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLKKRVRQAERGCLRRRTYLEQSSENKEGNKVKLQGQGLTSDITVRCLTNVEAFSLRTKDIEEVTTLFARFLRSRRVQGVIRYESPYWRSLAANRIQVGWRYRKKRLSRANTTQNDYQTLKSWAS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01737 175 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 61 - -
Trre12g01737 175 SUPERFAMILY Voltage-gated potassium channels 3 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01737 Trre-Chr12 17362478 17364257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01737 1 57 Ion Channels AT3G17690 77.193 8.75e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01737 K05391 - mtr:120580881 153.68