Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01719 ATGGAGTCATATGAGAAAGAAACTAGTCTAAAAAAGGAACATGTTGGTGCACTCTGTAGTGTAGTTGTGATAGGAAACAAAGTAGAGAATTTCAAGAAAGAAAAAGTTTCTCCTTTTCATGTCACATGTGATGGAGAAAATGAACATTTAGGGAAGTCTGGAGCATTAGGAATGTGTGATGATCCTTATTGTACTACTTGTCCTACTTACTTCAAGGCTTATCAACAAAGTAATCCAAAAGATTCAACTGAATATGATCCCAAGTTCCAAAGTGCACTTTATGGAGATGCCAAGGGTTTTGAGAGAAAACTTTTGTCTATCTTCTCTTCATTGCAGAAGGATTTTAATTGTATTGCTATCAACTGGACAATGACGGAAACACTAGTTTTACTTAGAAGCAAGAATGATTTTGTTTATTTCTTAAACATTTTTCTCCAGTTTTGGTTAGCCTATGTTTCTCCAGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGATGTACCCAAGAAAATTGCTGTCCATTACCTGAAGAGTTATTTTCTTATTGATTTGTTTGTTGTATTCCCTCTTCCTCAAGTTAAGTTCTTCTCCTCTTTCTCTATTCTTTATGGATTTTTTTTTCTTTTCTAG 630 0.3476 MESYEKETSLKKEHVGALCSVVVIGNKVENFKKEKVSPFHVTCDGENEHLGKSGALGMCDDPYCTTCPTYFKAYQQSNPKDSTEYDPKFQSALYGDAKGFERKLLSIFSSLQKDFNCIAINWTMTETLVLLRSKNDFVYFLNIFLQFWLAYVSPESRVVGAGDLVDVPKKIAVHYLKSYFLIDLFVVFPLPQVKFFSSFSILYGFFFLF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01719 209 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 115 196 - -
Trre12g01719 209 SUPERFAMILY Voltage-gated potassium channels 120 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01719 Trre-Chr12 17022952 17024333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01719 46 193 Ion Channels AT3G17690 43.316 1.76e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01719 K05391 - gmx:100785556 226.868