Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01716 ATGGTTATAAACACTTACACTACAATTTCTAGCTTGCTGGAGGGTGTTGGTGTCCTTGGGATTCAACACGTTGCATCATGCCTTCAACAACAGTGTGAAAGAACTGTTGGATGCAATCTCTCTCTGTCATACTCAAAGGAACTATGTTATCAGTCAATTTTTCCACAAGGAACCATTGGAAATCCATGTGGTGGAAACTCTACAATGATTAAGCTTGTGTGCTTAGATGCTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTTCTGTCATATCAAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCGCTGGACTACTATTTTTCACTCTGTTGATTGTAACACGATCTAATGATATCTTTCGGATGGCTCTTATTGCAAACGCATGGTTGAACAATGACGAAGTCAGAAAAGCAATTCACACTGTAGAGAAAAGTGTAGCCAGTAGTTGGGATTTATGCACAAACAAAATTTTCTTCGATCATAACTTCCAGAGGATATTGAGCTCTTATATTCAGATTGCTGAGTTTGAGAAAATTCCCGAAGAGAAGAGACAAAAGCTGAGTGATGGTGATTTTGGTGAAAGTGCAATCTGCAAGGAGCTATTCCTAATTGGAGTTTAA 726 0.3912 MVINTYTTISSLLEGVGVLGIQHVASCLQQQCERTVGCNLSLSYSKELCYQSIFPQGTIGNPCGGNSTMIKLVCLDAEGPFKYGIYQWALSVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLFFTLLIVTRSNDIFRMALIANAWLNNDEVRKAIHTVEKSVASSWDLCTNKIFFDHNFQRILSSYIQIAEFEKIPEEKRQKLSDGDFGESAICKELFLIGV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01716 241 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 147 - -
Trre12g01716 241 SUPERFAMILY Voltage-gated potassium channels 16 147 - -
Trre12g01716 241 Gene3D - 159 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01716 Trre-Chr12 16974374 16976289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01716 18 136 Ion Channels AT5G15410 70.492 9.87e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01716 K05391 - gmx:100798823 219.164