Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01634 ATGGGAACTGATACAATTGAAGGCATTATGTTGGACATCCCTAACTTAAAACAAGAAGTCCAGTTAAAAGCCAACATCTTTGATAATATGAAAAGGCTTAGAATCCTCATAGTTAGGAATGGACAAGTTTCTGGAGCACCACAAAATCTTCCAAATAATTTGAGATTGCTTGAGTGGAACAACTATCCTTTAACATCTCTACCTGATAATTTTCATCCAAAGACACTTGTTGTACTCAATTTGCCAAAGAGTCATATAGCAATGGATGAGCCATTCAAGAAGTTTGAGCACTTGACATTTATGAACTTCAGTGATTATGCAAGGAATTGTATGGCATTGACTCCTCAATCATCAGAAGTACTATTGAGTCAGGCATTTCAGGAGGTTGAGTACATAGACATAGTTGTTCCAAGGACAAAAGTTCCATCTTGGTTTGATCACTGTAATAAAGGGGAGTCTATCGCCTTTTGGATTCGTAAAAGTTTCCCTTCAATTGCTCTATTTTTTCTTTTAAGTGGTGATGATGAAAAGAAAACCAATTATACATGTGAATTCTGCATACTAATCAATGGCATACAAGTATTCCAAGGAAGAAGCGAGTGGCCGGTTGATCATGTATGGCTATTTGATCTGAGAATTCACCCCACTGCAAGTGAGTGGCAAGGCTTCAATGAACAAATAAAATCTGGTTGGAATCAGGTGGATATTTCATGTTCAGTCATCGATGAATCAAAAACTGTAACTATTAAATGTTGTGGAATTCATCTTTACAAAGATAGAATGAATATCCACCATGTCTCCTTCATAAGCCCTGATCTTCATGGCTCAAATATGGTTCATGATAATGAGAGTTTGGATATCTATAATGAAGAAAGAGAAGATGTAGTTTTTCCTACAATATTAGCTAAATATTTTAACAAGACTATATTAGAGGTCATGAGTGATCTTAAATCCAGCAAGAGAAAAGTAGGTAATGAATATGACAGTGACACTGATATTGACAGCCAGCACATGGAAGAGGAACAACATTCACCTTCCCTTAATCATCAAATCCTAGAAATCTTTGAACTTGTGGATAAAGACAATGGAAAAGATACTAATTCCAGTAAAATCTTCATTGATCCTTCAACTGAAACAGAAGAAGAACCCCTTGCTACAAGTATCCATAACAAGGAAGAAACACTTGCACAAAAAGCAAAGTTGAAGGAGATTGAAACTTTTAGACCAGAAGCAAGTACCATTGCATCAACAAGCAGAGACAAGGGAACACAATTAGTTAATAAAATCACTTCGGTGGGACAAGTCAATCTTGATTCAATAAAAAGCAAACAACTAATCCTAAATGCAGAAGCCTACATAAACAATGTTGAGTCTACAATAAATGAAGACAAGATGGAAGCATTTTATGCCTCACTTGAAGCAGAAAATAATTATCCTTTACTAGTCCAACTCAACAACGAAACTTTGACAAATAGGCCTAGTGAAGAAACTCAGAAAGCATTAAAGATTGTGCAAGATTTTGTCACAAAAAAGTTCTCTCTTTTGTTACATCCAGGACGTTCGGGATTGCTGAAAGATATTCTAAAGTATCTCATCAGTTTAAAACCAAATGAAGGAGTGTCCCTGAAAACAAAATCAGTACTACTGCAACTTTCACATGGTTTTGCTCAATGGAGTTTGGATTACAATAATGCAAATCTTAAAATTGAGTCAGCAACTACAGATCTATCAAAAGTTGAGAAAATGAAGGATTGCCTTGAAAGTAACGTGAAAGACTTCCGAGATATGGACATGGTGGAGAAGTGTTTGTCTAATCAGTTGGCCTGCTTGCAGGAAGAGAAGAGATTACTTGAAGAGAAAATCAATGCTATTAAAGCTGAGATTGAAGATTTCACAGAACAAAGAGAAATGGTTGCTAAGAGAAAGACGGAATTGTTTCACAAAGGAAGCGTGATAAAAGCAGAAAGGGATGATTTAAGGAACCAAGTTCCAAGGTTGAAAGCTGAGAAGGAATTGGCAAAGATAACACTAGCTAATATTGAAGAAGAGTGGTCAAAACTTGGAGAACAATTCATTGGAAGCACCGAAGCACCCATTTTGATGAGTGGGCCTTAG 2115 0.3622 MGTDTIEGIMLDIPNLKQEVQLKANIFDNMKRLRILIVRNGQVSGAPQNLPNNLRLLEWNNYPLTSLPDNFHPKTLVVLNLPKSHIAMDEPFKKFEHLTFMNFSDYARNCMALTPQSSEVLLSQAFQEVEYIDIVVPRTKVPSWFDHCNKGESIAFWIRKSFPSIALFFLLSGDDEKKTNYTCEFCILINGIQVFQGRSEWPVDHVWLFDLRIHPTASEWQGFNEQIKSGWNQVDISCSVIDESKTVTIKCCGIHLYKDRMNIHHVSFISPDLHGSNMVHDNESLDIYNEEREDVVFPTILAKYFNKTILEVMSDLKSSKRKVGNEYDSDTDIDSQHMEEEQHSPSLNHQILEIFELVDKDNGKDTNSSKIFIDPSTETEEEPLATSIHNKEETLAQKAKLKEIETFRPEASTIASTSRDKGTQLVNKITSVGQVNLDSIKSKQLILNAEAYINNVESTINEDKMEAFYASLEAENNYPLLVQLNNETLTNRPSEETQKALKIVQDFVTKKFSLLLHPGRSGLLKDILKYLISLKPNEGVSLKTKSVLLQLSHGFAQWSLDYNNANLKIESATTDLSKVEKMKDCLESNVKDFRDMDMVEKCLSNQLACLQEEKRLLEEKINAIKAEIEDFTEQREMVAKRKTELFHKGSVIKAERDDLRNQVPRLKAEKELAKITLANIEEEWSKLGEQFIGSTEAPILMSGP 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01634 704 Coils Coil 600 641 - -
Trre12g01634 704 SUPERFAMILY L domain-like 23 105 - -
Trre12g01634 704 Coils Coil 656 683 - -
Trre12g01634 704 MobiDBLite consensus disorder prediction 321 345 - -
Trre12g01634 704 Coils Coil 562 596 - -
Trre12g01634 704 Gene3D Ribonuclease Inhibitor 9 155 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01634 Trre-Chr12 16055061 16059424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01634 2 84 WRKY Transcription Factor Family AT4G12020 45.055 1.32e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01634 - - ahf:112751550 599.742