Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01633 ATGTGGAGATTTGAGGTATCTCCAACCATGTATGAATACGAATTAATTCAAAAGATCACTGAAGAAATATCTAGGAAATTAAATCTTACCCCTTTACACATAGCTCATCATCCAGTTGGTTTGAACTACAAAATGTCACAAGTGATGTCACTTCTTGAAATCAAGTCTAATAATGATGATTGCATGATTGGAATCTGTGGAATTGGTGGTATTGGTAAAACAACACTAGCTAGAGCAGTATATAACTCAATTTCTAGAAAGTTTGATAGTTCAAGTTTTCTTGTTGATATAAGAGAAAATTCAATGAAACATGGTTTAGTACACTTGCAAGAGACCCTTTTGCTTCATTTGCTAGATGAAAATATCAAGTTGGATGATGTGAGCAAAGGAATTCCTATATTAAAAAGACGGCTTCGCAACAAGAAAGTTCTTTTGATTCTTGATGATGTTGATAATCTTCAACAGTTAAGATCATTGGTTGGCAGCAAGGATTGGTTTGGTTTCGGAAGTAGGATTATCATAACAACAAGAGATAAACATTTATTGACTGCTCATGGAGTTAAAAAATTGTATGAAGTGAAAGAGCTTAATGAGCATGAATCTCTTGAACTGTTTAGTATGAATGCTTTTAGAAAAAATGTGCCTGATGAAGCTTATGTGGAGATAGCAAAAATTGTAGTGAAATATGCCAAAGGTCATCCATTAGCTTTGAATGTAATAGGATCAGATTTATTTGGAAAAACAATTGAAGAATGGAAAAGCGCATTGAATAAATATGAAACAATTCCAAGCAAAGAGATTCTGAATGTCCTTAAAGTAAGCTATGACAATTTGGATGATAATGAGAAAGAAATTTTCCTCGATATTGCTTGTTTCTTTAAAGGATATCCGAAGGCAGATGTAGAAAAGACGCTAGACGCAAGTCGTTTTTATTCGAAATATGGCATTGGAGTACTTGTTGATAAATCTCTTTTAACAATTGGTGAATCTGGTTCAGTAAAGATGCATGATCTTGTACAAGACCTAGGTAAAGACATTGCTCGAAAGGAATCACCATTTGATCCGAGCAAACGCAGAAGATTATGGCATCATGAGGATGTTGTTGAAGTCTTGACAGGAAACATGGGAACTGATACAATTGAAGGCATTATGTTGGACATCCCTAACTTAAAACAAGAAGTCCAGTTAAAAGCCAACATCTTTGATAATATGAAAAGGCTTAGAATCCTCATAGTTAGGAATGGACAAGTTTCTGGAGCACCACAAAATCTTCCAAATAATTTGAGATTGCTTGAGTGGAACAACTATCCTTTAACATCTCTACCTGATAATTTTCATCCAAAGACACTTGTTGTACTCAATTTGCCAAAGAGTCATATAGCAATGGATGAGCCATTCAAGAAGTTTGAGCACTTGACATTTATGAACTTCAGTGATTGTGACTCTATAACAAAACTACCTGATGTCTCTGCAACTCCAAATCTAACAAGAATTCTTGTTAATAGTTGTCCAAACTTGGTAGACATTCATGAATCTGTTGGAGATCTTGACAAACTAGTCACATTGAGTACTGAAGGATGCCCTAAACTCAAGAGTTTTCCGCGAGGCCTGAGATCAAAATATCTCGAATACCTTAATCTTAGAAAGTGTTCTAACATTAATAGTTTCCCAGATGTATTGGCAGAAGTGGAAAATATGAAAAATATTGACATAGGAGGGACATCCATAAAAAAATTTCCAAGTTCAATTGAAAACTTCAAAGGCCTTGAAGAATTAGTTTTAACATCATGCACAAATGTTGAGGATCTACCTAGTAATTCAGATATGTTTCAAAATATTGAAGAGCTTAATGTGGAAGGATGTCCACAACTTCCAAAACTTCTATGGAAGTCATTGGAAAACAGGACTACTAATGATTGGTTTCCAAAGTTAAGTAATCTGAGTCTGAAAAATTGTAATCTATCAGATGAAGATCTTGATTTAATTCTCAAATGTTTTCTACAATTAAAGTGGTTGATTCTATCAGATAACAATTTCTTGACCATTCCTGATTGCATTGAAGACCTTTCTCATCTCTTGCTTCTTAACATAGAAAACTGCAAGCATCTTAGAGATATATATGTGCTTCCACCATATTTGCAATATATAGATGCAAGGAATTGTATGGCATTGACTCCTCAATCATCAGAAGTACTATTGAGTCAGGCATTTCAGGAGGTTGAGTACATAGACATAGTTGTTCCAAGGACAAAAGTTCCATCTTGGTTTGATCACTGTAATAAAGGGGAGTCTATCGCCTTTTGGATTCGTAAAAGTTTCCCTTCAATTGCTCTATTTTTTCTTTTAAGTGGTGATGATGAAAAGAAAACCAATTATACATGTGAATTCTGCATACTAATCAATGGCATACAAGTATTCCAAGGAAGAAGCGAGTGGCCGGTTGATCATGTATGGCTATTTGATCTGAGAATTCACCCCACTGCAAGTGAGTGGCAAGGCTTCAATGAACAAATAAAATCTGGTTGGAATCAGGTGGATATTTCATGTTCAGTCATCGATGAATCAAAAACTGTAACTATTAAATGTTGTGGAATTCATCTTTACAAAGATAGAATGAATATCCACCATGTCTCCTTCATAAGCCCTGATCTTCATGGCTCAAATATGGTTCATGATAATGAGAGTTTGGATATCTATAATGAAGAAAGAGAAGATGTAGTTTTTCCTACAATATTAGCTAAATATTTTAACAAGACTATATTAGAGGTCATGAGTGATCTTAAATCCAGCAAGAGAAAAGTAGGTAATGAATATGACAGTGACACTGATATTGACAGCCAGCACATGGAAGAGGAACAACATTCACCTTCCCTTAATCATCAAATCCTAGAAATCTTTGAACTTGTGGATAAAGACAATGGAAAAGATACTAATTCCAGTAAAATCTTCATTGATCCTTCAACTGAAACAGAAGAAGAACCCCTTGCTACAAGTATCCATAACAAGGAAGAAACACTTGCACAAAAAGCAAAGTTGAAGGAGATTGAAACTTTTAGACCAGAAGCAAGTACCATTGCATCAACAAGCAGAGACAAGGGAACACAATTAGTTAATAAAATCACTTCGGTGGGACAAGTCAATCTTGATTCAATAAAAAGCAAACAACTAATCCTAAATGCAGAAGCCTACATAAACAATGTTGAGTCTACAATAAATGAAGACAAGATGGAAGCATTTTATGCCTCACTTGAAGCAGAAAATAATTATCCTTTACTAGTCCAACTCAACAACGAAACTTTGACAAATAGGCCTAGTGAAGAAACTCAGAAAGCATTAAAGATTGTGCAAGATTTTGTCACAAAAAAGTTCTCTCTTTTGTTACATCCAGGACGTTCGGGATTGCTGAAAGATATTCTAAAGTATCTCATCAGTTTAAAACCAAATGAAGGAGTGTCCCTGAAAACAAAATCAGTACTACTGCAACTTTCACATGGTTTTGCTCAATGGAGTTTGGATTACAATAATGCAAATCTTAAAATTGAGTCAGCAACTACAGATCTATCAAAAGTTGAGAAAATGAAGGATTGCCTTGAAAGTAACGTGAAAGACTTCCGAGATATGGACATGGTGGAGAAGTGTTTGTCTAATCAGTTGGCCTGCTTGCAGGAAGAGAAGAGATTACTTGAAGAGAAAATCAATGCTATTAAAGCTGAGATTGAAGATTTCACAGAACAAAGAGAAATGGTTGCTAAGAGAAAGACGGAATTGTTTCACAAAGGAAGCGTGATAAAAGCAGAAAGGGATGATTTAAGGAACCAAGTTCCAAGGTTGAAAGCTGAGAAGGAATTGGCAAAGATAACACTAGCTAATATTGAAGAAGAGTGGTCAAAACTTGGAGAACAATTCATTGGAAGCACCGAAGCACCCATTTTGATGAGTGGGCCTTAG 3948 0.3513 MWRFEVSPTMYEYELIQKITEEISRKLNLTPLHIAHHPVGLNYKMSQVMSLLEIKSNNDDCMIGICGIGGIGKTTLARAVYNSISRKFDSSSFLVDIRENSMKHGLVHLQETLLLHLLDENIKLDDVSKGIPILKRRLRNKKVLLILDDVDNLQQLRSLVGSKDWFGFGSRIIITTRDKHLLTAHGVKKLYEVKELNEHESLELFSMNAFRKNVPDEAYVEIAKIVVKYAKGHPLALNVIGSDLFGKTIEEWKSALNKYETIPSKEILNVLKVSYDNLDDNEKEIFLDIACFFKGYPKADVEKTLDASRFYSKYGIGVLVDKSLLTIGESGSVKMHDLVQDLGKDIARKESPFDPSKRRRLWHHEDVVEVLTGNMGTDTIEGIMLDIPNLKQEVQLKANIFDNMKRLRILIVRNGQVSGAPQNLPNNLRLLEWNNYPLTSLPDNFHPKTLVVLNLPKSHIAMDEPFKKFEHLTFMNFSDCDSITKLPDVSATPNLTRILVNSCPNLVDIHESVGDLDKLVTLSTEGCPKLKSFPRGLRSKYLEYLNLRKCSNINSFPDVLAEVENMKNIDIGGTSIKKFPSSIENFKGLEELVLTSCTNVEDLPSNSDMFQNIEELNVEGCPQLPKLLWKSLENRTTNDWFPKLSNLSLKNCNLSDEDLDLILKCFLQLKWLILSDNNFLTIPDCIEDLSHLLLLNIENCKHLRDIYVLPPYLQYIDARNCMALTPQSSEVLLSQAFQEVEYIDIVVPRTKVPSWFDHCNKGESIAFWIRKSFPSIALFFLLSGDDEKKTNYTCEFCILINGIQVFQGRSEWPVDHVWLFDLRIHPTASEWQGFNEQIKSGWNQVDISCSVIDESKTVTIKCCGIHLYKDRMNIHHVSFISPDLHGSNMVHDNESLDIYNEEREDVVFPTILAKYFNKTILEVMSDLKSSKRKVGNEYDSDTDIDSQHMEEEQHSPSLNHQILEIFELVDKDNGKDTNSSKIFIDPSTETEEEPLATSIHNKEETLAQKAKLKEIETFRPEASTIASTSRDKGTQLVNKITSVGQVNLDSIKSKQLILNAEAYINNVESTINEDKMEAFYASLEAENNYPLLVQLNNETLTNRPSEETQKALKIVQDFVTKKFSLLLHPGRSGLLKDILKYLISLKPNEGVSLKTKSVLLQLSHGFAQWSLDYNNANLKIESATTDLSKVEKMKDCLESNVKDFRDMDMVEKCLSNQLACLQEEKRLLEEKINAIKAEIEDFTEQREMVAKRKTELFHKGSVIKAERDDLRNQVPRLKAEKELAKITLANIEEEWSKLGEQFIGSTEAPILMSGP 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01633 1315 Coils Coil 1267 1294 - -
Trre12g01633 1315 PRINTS Disease resistance protein signature 62 77 - -
Trre12g01633 1315 PRINTS Disease resistance protein signature 137 151 - -
Trre12g01633 1315 PRINTS Disease resistance protein signature 230 244 - -
Trre12g01633 1315 PRINTS Disease resistance protein signature 687 703 - -
Trre12g01633 1315 SMART AAA_5 59 196 IPR003593 GO:0016887
Trre12g01633 1315 SUPERFAMILY L domain-like 401 729 - -
Trre12g01633 1315 Gene3D - 195 279 IPR042197 -
Trre12g01633 1315 Coils Coil 1173 1207 - -
Trre12g01633 1315 SUPERFAMILY "Winged helix" DNA-binding domain 265 371 IPR036390 -
Trre12g01633 1315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 289 IPR027417 -
Trre12g01633 1315 Gene3D - 20 189 IPR027417 -
Trre12g01633 1315 Pfam NB-ARC domain 43 274 IPR002182 GO:0043531
Trre12g01633 1315 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 638 IPR044974 GO:0006952
Trre12g01633 1315 Coils Coil 1211 1252 - -
Trre12g01633 1315 MobiDBLite consensus disorder prediction 932 956 - -
Trre12g01633 1315 Gene3D Ribonuclease Inhibitor 541 772 IPR032675 -
Trre12g01633 1315 Gene3D Ribonuclease Inhibitor 384 540 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01633 Trre-Chr12 16053590 16059424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01633 39 627 WRKY Transcription Factor Family AT4G12020 34.811 2.03e-87 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01633 - - pcin:129293148 1429.08