Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01621 ATGGGAAAAGATATTGTTAAACAAGAATCACCGAATCCTGGGGAACGCAGTAGGTTATGGGACTCTAAAGATATAAATGAAGTTTTAAAAGAAAATAAGGGAACAAGTAAAACTGGAATCATTTATGTGAACGATAGTATTGAATTGGAACGGGATGGAGAAGCTTTCAACAAGATGGAAAATCTCAAAACACTACTTATTGATGAAGAGGGTTGTTTTGACGATGAAAGTGTCAAACATCTTCCAAATAGTCTAAGAGTACTGGATTGTAGATCAATCGAAACACCCGTGCTCTTTCCCAATAAGGCAAGTAAGTTCCAAAATATGAGAATTCTAAATTTTTATAACTCGCGAGAAGATTTATTACCAATACATGACCTATCTAATCTCCCAAACTTAGAAGAACTTTCAATTCAAGGTTGTTCGGGCAAATTTACAAGTGATAAATCAGTTTGTTTTTTGAGTAATCTTAAAATCTTGAGAATTAAAGATTGTGAAGATGTCACAAGTGTTCCACCACTTGATTGCCCATCCTTGGTAGAACTCAATTTTTCATATTGCTACAGTCTAAGGAGTATTCCACCTCTCAAGTTTACTTCTCTCAAAGAACTCGATCTTAAAAATTGTATCAGTCTTCAGAATTTTCCACTTGTGGTCGACGAGTTTCTGGGAAAACTTAAAATCCTACGTCTTGAAAATTGTTACAATCTTAAGAGTATTCCACCACTCAAGTTGGATGTGCTAGAGGAACTTGACCTTTCAAATTGTTCTATGCTCGATAGTTTTCCACCTGTGCAAAAGCAAATTACTAAATCAGAAATTACATGA 828 0.3478 MGKDIVKQESPNPGERSRLWDSKDINEVLKENKGTSKTGIIYVNDSIELERDGEAFNKMENLKTLLIDEEGCFDDESVKHLPNSLRVLDCRSIETPVLFPNKASKFQNMRILNFYNSREDLLPIHDLSNLPNLEELSIQGCSGKFTSDKSVCFLSNLKILRIKDCEDVTSVPPLDCPSLVELNFSYCYSLRSIPPLKFTSLKELDLKNCISLQNFPLVVDEFLGKLKILRLENCYNLKSIPPLKLDVLEELDLSNCSMLDSFPPVQKQITKSEIT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01621 275 Gene3D Ribonuclease Inhibitor 8 270 IPR032675 -
Trre12g01621 275 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 216 IPR044974 GO:0006952
Trre12g01621 275 SUPERFAMILY L domain-like 55 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01621 Trre-Chr12 15917762 15920027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01621 2 269 WRKY Transcription Factor Family AT4G12020 28.896 2.97e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01621 - - mtr:11419324 259.225