Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01620 ATGGGAAAAGATATTGTTAAACAAGAATCACCGAATCCTGGGGAACGCAGTAGGTTATGGGACTCTAAAGATATAAATGAAGTTTTAAAAGAAAATAAGGGAACAAGTAAAACTGGAATCATTTATGTGAACGATAGTATTGAATTGGAACGGGATGGAGAAGCTTTCAACAAGATGGAAAATCTCAAAACACTACTTATTGATGAAGAGGGTTGTTTTGACGATGAAAGTGTCAAACATCTTCCAAATAGTCTAAGAGTACTGGATTGTAGATCAATCGAAACACCCGTGCTCTTTCCCAATAAGGCAAGTAAGTTCCAAAATATGAGAATTCTAAATTTTTATAACTCGCGAGAAGATTTATTACCAATACATGACCTATCTAATCTCCCAAACTTAGAAGAACTTTCAATTCAAGGTTGTTCGGGCAAATTTACAAGTGATAAATCAGTTTGTTTTTTGAGTAATCTTAAAATCTTGAGAATTAAAGATTGTGAAGATGTCACAAGTGTTCCACCACTTGATTGCCCATCCTTGGTAGAACTCAATTTTTCATATTGCTACAGTCTAAGGAGTATTCCACCTCTCAAGTTTACTTCTCTCAAAGAACTCGATCTTAAAAATTGTATCAGTCTTCAGAATTTTCCACTTGTGGTCGACGAGTTTCTGGGAAAACTTAAAATCCTACGTCTTGAAAATTGTTACAATCTTAAGAGTATTCCACCACTCAAGTTGGATGTGCTAGAGGAACTTGACCTTTCAAATTGTTCTATGCTCGATAGTTTTCCACCTGTGTGCATCATTCTTAAAAGTATCCCGCCGCTCAAAGTCACTTCGTTGGAAAAGTTCAATATTTCACATTGTCTAAGTCTAGAGAGTTTTCCAGAAATATTGGGAGACATTAGAAGTATACCAGAACTTCACTTGGATAATATTCCCAAAATATTATTGCCTCTTCCATTGCAAAATCTTACTCCGCCTCACACATTATATCCCTGTAACTGTGGAATAGTATATTTTCCAAATAGAGTTGCCGAGGTGTCGATACTGGCTGAATCTACCATTGAGGTTGAAGGAAATGTTAGCCCAATGAAATCTTCACATGTAGAATATATTTGTCTGTATGACAGAAAACTATCAGATGAATATTGGTCAATAAGTTTCATGTTGTTTGCTAATGTGAAAGAATTACACCTAGCTAAAAATCTATTCACTGTTCTTCCTAAATCTATGGAAACATGTAATTTTTTATGGAGGCTTGTCTTGGATGATTGTGTGGAACTTCAAGAAATTAAAGGGATTCCTCCTTGCTTAAAAGTGTTATCTGCACTAAACTGTCAATTGTTGACTTCGTCAAGCAAAAGCAAATTACTAAATCAGAAATTACATGAGGCTGGAGACACTTGGTTCCGCTTGCCACGGGCAAAAATTCCAGACTGGTTCGATCACCAATGCTTGGCAGGACTGTCAATTTCTTTCTGGTTTCGTAACAAGTTTCCTGCCATAGCTCTCTGCATTGTTTCTCCATTGACGTTGTATAAATCTCGACATCATGTAAGAGTGATCATCAATGGCAATACATTTTTCTATATATGTGATGATACGAGACATAAGTCACAGGCTAAAATGTATCATTTACATCTTTTTCATATGAAAATGGAAAAGTTCAATGATAATATGGACAAAGCACTTTTCGAAAATAAGTGGAACCATGCAGAGGTTGACTTTGGATTTCCATTCATGTATAGTGGAATCCATGTATTGAAAGACAAAAGTAGCATGGAGGATATTCAATTCACCAACCCAGAGATTGAATTGTACTAA 1824 0.3569 MGKDIVKQESPNPGERSRLWDSKDINEVLKENKGTSKTGIIYVNDSIELERDGEAFNKMENLKTLLIDEEGCFDDESVKHLPNSLRVLDCRSIETPVLFPNKASKFQNMRILNFYNSREDLLPIHDLSNLPNLEELSIQGCSGKFTSDKSVCFLSNLKILRIKDCEDVTSVPPLDCPSLVELNFSYCYSLRSIPPLKFTSLKELDLKNCISLQNFPLVVDEFLGKLKILRLENCYNLKSIPPLKLDVLEELDLSNCSMLDSFPPVCIILKSIPPLKVTSLEKFNISHCLSLESFPEILGDIRSIPELHLDNIPKILLPLPLQNLTPPHTLYPCNCGIVYFPNRVAEVSILAESTIEVEGNVSPMKSSHVEYICLYDRKLSDEYWSISFMLFANVKELHLAKNLFTVLPKSMETCNFLWRLVLDDCVELQEIKGIPPCLKVLSALNCQLLTSSSKSKLLNQKLHEAGDTWFRLPRAKIPDWFDHQCLAGLSISFWFRNKFPAIALCIVSPLTLYKSRHHVRVIINGNTFFYICDDTRHKSQAKMYHLHLFHMKMEKFNDNMDKALFENKWNHAEVDFGFPFMYSGIHVLKDKSSMEDIQFTNPEIELY 607
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01620 607 SUPERFAMILY L domain-like 169 455 - -
Trre12g01620 607 Gene3D Ribonuclease Inhibitor 346 508 IPR032675 -
Trre12g01620 607 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 49 210 - -
Trre12g01620 607 Gene3D Ribonuclease Inhibitor 10 336 IPR032675 -
Trre12g01620 607 SUPERFAMILY Outer arm dynein light chain 1 54 167 - -
Trre12g01620 607 Pfam C-JID domain 472 578 IPR045344 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre12g01620 Trre-Chr12 15917762 15920460 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01620 2 263 WRKY Transcription Factor Family AT4G12020 29.470 2.51e-16 81.3