Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01587 ATGAGAGAAAATATATCAGAAACATGGTTAGTTATGATCATTGTGATATTGGTCACTGCAATATTTGCAAAATTAATTCAAATCAAACTAAGAAAAGAAGAGAAAAAAAGCATTTGCAGATTACCACCAGGAAGGAGAGGTTGGCCTTTGATAGGTGATAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCACCCTCCTCAGTTTGTTGAAGAAATGGTGCAAAGATATGGTAAGATATTTTCTTGCAGCCTATTTGGAAAATGGGCAGTGGTGTCATCAGATCCGAGTTTCAACCGTTTTGTAATGCAAAATGAAGGAAAATTGTTCATGTCAAGTTATCCAAAATCGTTTAGAGATTTGGTTGGTAAAAACGGTGTAATCACAGTTCAAGGCGAGCAACAAAGAAAACTACATGGAATTGCGTCCAATATGATGCGCTTAGATAAGCTTAAGTTCCATTTCATGAACGATATACAAAATGTCATGATCCAAACTTTGAGTAATTTTAAGGACAACCAAGTAATTCTCCTCCAAGATGTTTGTAGAAAGGTAGCTATAAATTTAATGGTTAATCAATTATTAGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAGTTGTTTTCTGATTTTGTTGATGGTTGTTTATCTATTCCAATCAACATCCCTGGCTCTTCATACCACACTGCTATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAATATCATAGAGGTACACAGAAAAAATGGTGCTCCCACAGAAGGTAATAATGGTGTACTTGGAAGACTAATAGAGGAAGATTGTTTGCCAGATGAGGCTGTTGCAGATTTCATCATTAATCTTCTTTTTGCTGGCAATGAAACAACAACAAAAACAATGCTTTTTGCAGTTTATTTCCTTACTCAATGTCCTAAAGCCATGAAGCAACTTCTGGATGAACATGATTCTCTAAGGACTAATTCTGGAGAAGAATTTCTTACATGGCAGGACTATAAAGCAATGCCATTTACTCAATGTGTTATTGATGAAACACTTAGATTTGGTGGCATTGCAATTTGGTTAATGAGAGAAGCAAAACAAGACATTCAATACCAAGATTTTGTTATTCCAAAAGGATGCTTTGTGGTTCCATTTCTTTCAGCAGTTCATTTAGATGAGAAAATATTCAATGGAGCTAAAAACTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGAAAAGAGAAATTGGAGAACAAGTCCATTTTATGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCAGGAGCTGAATTGGCTCGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTAACAAATTATAGATGGACACAAATGAAGGAAGATAGAATGTCCTTCTTTCCCTCAGCTCGGTTAGTGAATGGCTTCGAAATTTGTCTAACAAGAAGACATGATTATAATCAAAGAAACTGA 1467 0.3586 MRENISETWLVMIIVILVTAIFAKLIQIKLRKEEKKSICRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVQRYGKIFSCSLFGKWAVVSSDPSFNRFVMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIQTLSNFKDNQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGSSYHTAMKAREKIISKINNIIEVHRKNGAPTEGNNGVLGRLIEEDCLPDEAVADFIINLLFAGNETTTKTMLFAVYFLTQCPKAMKQLLDEHDSLRTNSGEEFLTWQDYKAMPFTQCVIDETLRFGGIAIWLMREAKQDIQYQDFVIPKGCFVVPFLSAVHLDEKIFNGAKNFNPWRWMEPENEEKRNWRTSPFYAPFGGGARFCPGAELARLQIALFLHYFVTNYRWTQMKEDRMSFFPSARLVNGFEICLTRRHDYNQRN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01587 488 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 SUPERFAMILY Cytochrome P450 39 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 CDD CYP90-like 74 480 - -
Trre12g01587 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Trre12g01587 488 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS E-class P450 group IV signature 415 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS E-class P450 group IV signature 68 91 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PRINTS E-class P450 group IV signature 279 305 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 FunFam Cytochrome P450 720B1 family 30 481 - -
Trre12g01587 488 Pfam Cytochrome P450 42 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 Gene3D Cytochrome P450 30 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre12g01587 488 PANTHER CYTOCHROME P450 26 37 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01587 Trre-Chr12 15675505 15680301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01587 6 481 Cytochrome P450 AT1G73340 70.650 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01587 - - mtr:11414632 905.59