Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01586 ATGGGGTGGGAGAAGCTACAACAAATTGCTTTTGGCATAGCGAAAGGAATTGAGTATCTTCATGAGGGATGTAACCATCCAATCCTTCACTTTGACATCAACCCTCACAATGTTTTGCTAGATGACACTTTCACTCCGAAAATTTCAGATTTTGGTCTCGCCAAAATATGTTCCAAGAATCTTAGTATGGTGTCCATGACAGCTGCGAGGGGAACCTTAGGATATATGGCGCCTGAAGTTTTGTCCCGTAATTTTGGCAATGTTTCTCTTAAGTCTGATATTTACAGTTACGGAATGTTGTTGTTAGAACTAGTTGGAGGAAGAAAGAACGTTGACTCATCATCGTCTACTGAAAATTTCAATGTTTTATATCCAGAATGGATCCATAACTTATTGGAAGGAGACATACATATTCATATCGAAGATGAAGGCGATGTTAAAATCGCAAAGAAACTTGCAATTGTCGGACTTTGGTGCATTCAATGGCAACCAATGAACCGTCCTTCCATAAAAACCGTCGTACAAATGTTGGAAACAGAATGTTTCAACCAATTAAATTTTCCACCTAATCCTTTTCATTCCACCACTTCCATTACCACTAGTGAAGGATCTTTGGCAAGACAACCTTTCCAAATGGAAGTGATTCAGGAATAA 654 0.3884 MGWEKLQQIAFGIAKGIEYLHEGCNHPILHFDINPHNVLLDDTFTPKISDFGLAKICSKNLSMVSMTAARGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLELVGGRKNVDSSSSTENFNVLYPEWIHNLLEGDIHIHIEDEGDVKIAKKLAIVGLWCIQWQPMNRPSIKTVVQMLETECFNQLNFPPNPFHSTTSITTSEGSLARQPFQMEVIQE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01586 217 Gene3D Transferase(Phosphotransferase) domain 1 1 186 - -
Trre12g01586 217 SUPERFAMILY Protein kinase-like (PK-like) 2 178 IPR011009 -
Trre12g01586 217 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre12g01586 217 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 196 IPR045874 GO:0004672
Trre12g01586 217 Pfam Protein kinase domain 5 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre12g01586 217 FunFam PR5-like receptor kinase 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01586 Trre-Chr12 15671299 15671952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01586 1 191 Receptor kinase-like Gene Family AT1G66910 49.746 1.65e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre12g01586 Pkinase 3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01586 - - mtr:120575814 370.933