Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01543 ATGGCCTCAACCCCGAAACCAAACCTTCCATGGAAAGCTCGTCTCTCCATGTCTATCTTCGATTTCGTCCTCTCCCTCTCTCGTCGCTCCAACGACACCATCGATCGCCGCCTCCTCGACTTCATTGTTAGGAAAGTTGCTCCCAATCCCAACTTTGTTGATGGAGTGTCTTCCTCTGATGTCATTGTGGATCCGACACGCAATCTTTTGTTTCGACTTTTTATCCCTTCTTCAAATTTTATCGACATTGGCACATCCCTCCCCGTGTTTGTGTTTTTCCATGGTGGCGGCTTTGCATTCATGTCTTCATCTTCTATCCAATATGATACTCTTTGCCGCTTATTTTGTCGTTCATTTCCCGCAATTATTGTATCGGTTAATTACCGTCTTGCCCCTGAGCATCGTTTTCCATCCCAATATGATGACGGTTTGGAAATTCTTAAGTTCCTCGACAAAAACGAAAATATTTTGGGAAAGTTTGCTGACATCAGCAAATGTTTTTTGTCGGGTGATAGTGCGGGTGGAAATTTGGCCCATCATGTGGCAATTCAGGTTTCCTCGGAGAATCTCCAAATTTTAAAGGTTATCGGGTTGGTTTCAATACAACCATTTTTTGGAGGAGAGGAGCGAACCGAATCTGAAATCCGGTCGAAATGGGCCCCCGTTGTTTCTTTGGATAAAACCGATTGGTATTGGAAGATGTTTTTGCCGGATGGGTCAACCCGAGATCATGAATCAGTTAATGTTAGTGGGCCTAATGCTATTGATATTTTGAATGTGGATTACCCGAATACCCTCTTGTGTGTGGGTGGATTTGACCCATTAGTGGATTGGCAAAAGAGGTATTATGAGTGGTTGATAAAATCCGGAAAAGAAGTGGAATTAATCGAATATCCAAATATGATTCATGGTTTTTATTGTTTTCCAGAAATACCAGAGACATCCCATTTTATTTCTAAAATTAAGAGTTTCATGACTAAGCAAATGTTTAGTCTGTGA 999 0.4184 MASTPKPNLPWKARLSMSIFDFVLSLSRRSNDTIDRRLLDFIVRKVAPNPNFVDGVSSSDVIVDPTRNLLFRLFIPSSNFIDIGTSLPVFVFFHGGGFAFMSSSSIQYDTLCRLFCRSFPAIIVSVNYRLAPEHRFPSQYDDGLEILKFLDKNENILGKFADISKCFLSGDSAGGNLAHHVAIQVSSENLQILKVIGLVSIQPFFGGEERTESEIRSKWAPVVSLDKTDWYWKMFLPDGSTRDHESVNVSGPNAIDILNVDYPNTLLCVGGFDPLVDWQKRYYEWLIKSGKEVELIEYPNMIHGFYCFPEIPETSHFISKIKSFMTKQMFSL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01543 332 Gene3D alpha/beta hydrolase 2 330 IPR029058 -
Trre12g01543 332 PANTHER ARYLACETAMIDE DEACETYLASE 37 308 - -
Trre12g01543 332 Pfam alpha/beta hydrolase fold 90 306 IPR013094 GO:0016787
Trre12g01543 332 SUPERFAMILY alpha/beta-Hydrolases 38 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01543 Trre-Chr12 15280716 15281714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01543 1 328 Carbohydrate Esterase AT3G05120 36.311 4.77e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01543 - - gmx:100799815 431.795