Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre12g01539 ATGGCCTCTAACACCAAACCAAACCTTCCATGGAAGGTGACCACCACTATGTCCATTCTCAATGCAATTAATAATATCACCGGTCGTTCTAATGGTACTATAAACCGTCGTCTCCTCGCCATTATTGACTTAAAATTTCCTACCAGTCGTAATTTCAAATCCAACGGCGTCTCTTCCTCTGATGTGATCGTGGACTCGACATGCAACCTCTGGTTTCGCCTATTCATCCCTTCCTCTACCTCCACTATTGCCGCAACATCTCTCCCTGTTATTATATACTTTCATGGAGGCGGCTTCGCATACATGTCTCCATCTTCTGTCCTATATCACTTATTTTGTCGTTTTCTTTGTCGTTCTTTTCCTGCCATTGTTGTCTCAGTTAATTATCGTCTTACACCTGAACACCGTTTTCCATCCCAAAATGATGACGGTTTGAAAATCCTTAAGTTTCTTGATCAAAATGGCGACATTTTAGGAAAATATGCTAACATTAACAAATGTTTTTTAATGGGTGACAGTGCGGGTGGAAATGTGGTCCATCATGTGGCAATTCGAGTTGCTTTTGAAAAGCTCCGAGTTTTGAAGGTTATCGGGTTGGTTTCAATCCAACCATTTTTTGGAGGAGAGGAACGGACTGAGTCCGAGATTCGATTGAAATGGGTACCCATTTGTTCAATGGATAAAACCGATTGGTATTTAAAGATGTTTTTACCGGACGGGTCAAACCGAGACCATGAAGCGATTAATGTTTGTGGGCCTAATGCAATGGATATTTCAAAAGTGGATTACCCAAATACTCTCTTGTTTGTTGGTGGATTTGACCCGTTAGTGGATTGGCAAAAGAGGTATTATGAGTGGTTAAGAAAATCTGGAAAGGAAGTGGAACTAATCGAATATCCAAATATGATTCATGCTTTTTTTTACTTTCATGACTTGCCAGATACTCGTCACTTTATTTCTAAAGTCAAAGAATTTATGATCAAACAAATGGTTAATATGAATTACTCCACTGCAGAGGGGTGA 1023 0.3988 MASNTKPNLPWKVTTTMSILNAINNITGRSNGTINRRLLAIIDLKFPTSRNFKSNGVSSSDVIVDSTCNLWFRLFIPSSTSTIAATSLPVIIYFHGGGFAYMSPSSVLYHLFCRFLCRSFPAIVVSVNYRLTPEHRFPSQNDDGLKILKFLDQNGDILGKYANINKCFLMGDSAGGNVVHHVAIRVAFEKLRVLKVIGLVSIQPFFGGEERTESEIRLKWVPICSMDKTDWYLKMFLPDGSNRDHEAINVCGPNAMDISKVDYPNTLLFVGGFDPLVDWQKRYYEWLRKSGKEVELIEYPNMIHAFFYFHDLPDTRHFISKVKEFMIKQMVNMNYSTAEG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre12g01539 340 Pfam alpha/beta hydrolase fold 91 307 IPR013094 GO:0016787
Trre12g01539 340 PANTHER ARYLACETAMIDE DEACETYLASE 50 307 - -
Trre12g01539 340 SUPERFAMILY alpha/beta-Hydrolases 47 326 IPR029058 -
Trre12g01539 340 Gene3D alpha/beta hydrolase 1 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre12g01539 Trre-Chr12 15219612 15220634 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre12g01539 29 325 Carbohydrate Esterase AT3G63010 38.585 1.53e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre12g01539 - - gmx:100812838 429.098